Papaver somniferum (opium poppy): 113322271
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Entry
113322271 CDS
T05758
Name
(RefSeq) RNA-binding protein Y14A-like
KO
K12876
RNA-binding protein 8A
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
psom03015
mRNA surveillance pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113322271
09122 Translation
03013 Nucleocytoplasmic transport
113322271
03015 mRNA surveillance pathway
113322271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113322271
03041 Spliceosome [BR:
psom03041
]
113322271
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113322271
Spliceosome [BR:
psom03041
]
Complex C
Other components
EJC/TREX
113322271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
113322271
NCBI-ProteinID:
XP_026426118
LinkDB
All DBs
Position
11:61742866..61745145
Genome browser
AA seq
188 aa
AA seq
DB search
MANAEVDVVDYEDEDMEDAVEFDAPKLRSAVTDSSSAPLKTKGRGFREAMTAEAERNTRF
ASKDFDSLASDGGGPAAQRSIEGWIVLVTGIHEEAQEDDLHAAFGEFGEVKNLHLNLDRR
TGFVKGYALMEFEQFDEAQAAISAMNGAELLTQIISVDWAFSKGPFKQRNTRRRSPRGHR
SRSPRRRF
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgctgaagtagatgttgtagattatgaagacgaagatatggaagatgcagtt
gaattcgatgcacccaaactcagatcagccgttaccgattcctcatctgctccattaaag
accaaaggacgaggttttcgtgaagcaatgacagctgaagctgaacgcaatactcgcttc
gcttctaaggattttgattcactcgcttctgacggtggtggtcctgctgctcaacgatct
atcgagggttggatagttttggttactggaatccacgaagaagctcaagaggatgatcta
catgctgcatttggtgagtttggggaagtgaagaatttgcatctaaatcttgaccgcagg
actgggtttgtaaagggatatgcattgatggaatttgagcagtttgatgaagctcaagct
gccatatctgcaatgaatggtgcggaacttctaacacagatcatctcagttgactgggcc
ttcagcaaaggaccattcaaacaaaggaacaccagaaggagatccccacgtgggcatcgc
tcgaggagtcctaggagacgcttttga
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