Papaver somniferum (opium poppy): 113322280
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Entry
113322280 CDS
T05758
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113322280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113322280
03036 Chromosome and associated proteins [BR:
psom03036
]
113322280
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113322280
Coactivators
SAGA/TFTC/STAGA complex
113322280
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113322280
STAGA complex
113322280
TFTC complex
113322280
SAGA complex
113322280
SLIK complex
113322280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
113322280
NCBI-ProteinID:
XP_026426128
LinkDB
All DBs
Position
11:complement(106557156..106562021)
Genome browser
AA seq
621 aa
AA seq
DB search
MAENQVTSPKSILSTNSIDSIQQQQQQNPSLLSPPCSNNNNMLSPSSSMDHQISSPQISI
TQTPSLSANSSQSSLLQQQQQQQQQINPNVLQQQQQLNQQQQLNQQQQNLMSQKNFGQMQ
RSPSMSRMSQLQQQQQQTYGMATGTMLQQTGVYGQMNFGATSNLQQQQLQQQQQQQMVSG
GGGLSRSGLIGQVSGQLPMLPGQAAAAANAQYNIQSQLMPRQKANLIQGSQFLAGNNPAQ
TLQGLQSLGVMGMGQLGQNRSLAYAQQLKQVQMRQQQLPQQTSLTSPQKLQGLQRASSMA
ALNPQLAGLTQNGQPTMLTQQQWFKQIQQPISSAGSPSFQLQQQQRQQQQTYLPQQLASS
PQLHTKSMTMNQQQLSQLVNQQPQLVNQQSQLHQQQQQQQQQQQLQQQQQQQQQQQQQSP
RMPGSTVQKSFSLTGSQPDTPASGTTTPGGSSSHGTEANNQLLGKRKIQDLVSQVDSQGK
LDSEVEDLLLEIADDFIDSVTTFACSLAKHRKSATLESKDLLLHLEKNWHLTIPGFTGEE
QRYSKRPLSGDLHKKRLEMIRALMESSQQPENTKMINPKDTMKQGFMHPVGVNHQLRTPT
NSEQLVSSLAGSSMLQQLPRF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaatcaagtaacttcgccgaaatcaattctatcaacaaattcaattgattca
attcaacagcaacaacaacaaaaccccagtcttctttctcctccttgttcgaataacaat
aatatgctatctccgtcgtcttcaatggatcatcagatctcatctcctcaaatttctata
actcaaacaccttcgctttcagctaattcatctcaatcctctttacttcaacaacaacaa
cagcaacaacagcaaattaaccctaatgttttacaacagcaacaacagctgaatcaacaa
caacaattgaatcaacagcaacagaatttgatgtcgcagaagaattttggtcaaatgcag
agatcaccatcaatgtcaaggatgagtcaattacagcagcagcagcagcaaacgtatggt
atggcgactgggacaatgttacaacaaacgggtgtatatgggcagatgaattttggtgct
acatcgaatctccaacaacagcagctgcagcaacagcagcagcagcaaatggttagtggg
ggtgggggtttatctaggtcaggtttgattggacaagttagtgggcaactgccaatgttg
cctggccaagcagcagctgcagctaatgctcaatataatattcaatctcaattgatgccg
aggcaaaaggcaaatttgatccaaggatcccagtttcttgcgggtaataatcctgcacaa
acattgcaaggacttcagtcattaggagtgatggggatgggtcagcttggacagaatagg
tcacttgcttatgcacagcagttaaagcaagtgcaaatgaggcaacaacagttgccccaa
cagacatctcttacttctcctcagaagctacagggtctacaaagggcatcatcaatggct
gctttgaatccccaattagcagggttgactcagaatgggcaaccaactatgttgacacag
cagcaatggttcaagcaaatacagcaaccaatatcttctgcaggttctccctctttccag
ctgcaacaacagcagaggcaacaacagcagacatacttgcctcagcagctagcatcatct
ccccaattgcacacaaaatccatgaccatgaaccagcagcaactatcccagctagtaaat
cagcaaccacagctggtgaatcagcagtcgcaattgcatcagcagcagcaacagcaacag
cagcagcaacaactacaacaacagcaacagcaacagcagcaacaacaacaacagtctcca
aggatgcctggttcaactgttcaaaaatcatttagcttgaccggatcacaaccagatact
cctgcatctggcaccaccacacctgggggtagttcaagccatggaacagaggcaaacaat
caacttcttggaaaaagaaagatacaagatttggtctctcaggtggattcacaaggaaag
ctggattctgaagttgaagatctcctattggagatagctgatgacttcattgattcggtc
accacatttgcttgcagtttagctaagcatcggaaatctgcaacgttggaatccaaggat
ttgttgctacaccttgagaagaattggcatttaacaatcccaggatttacaggcgaggag
cagagatactcaaaaagaccgttatccggtgatcttcacaagaagcgtctcgagatgata
cgagcacttatggaatcctcgcaacagccggagaatacgaaaatgatcaatcctaaagat
accatgaaacagggatttatgcatccagttggagttaaccatcaacttagaacacccaca
aattcggagcaattggtttcttcgttagctggatcttcaatgttgcagcaacttcccagg
ttttaa
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