Papaver somniferum (opium poppy): 113322299
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Entry
113322299 CDS
T05758
Name
(RefSeq) diaminopimelate decarboxylase 2, chloroplastic-like
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00300
Lysine biosynthesis
psom00470
D-Amino acid metabolism
psom01100
Metabolic pathways
psom01110
Biosynthesis of secondary metabolites
psom01230
Biosynthesis of amino acids
Module
psom_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
113322299
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
113322299
Enzymes [BR:
psom01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
113322299
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
113322299
NCBI-ProteinID:
XP_026426151
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Position
11:64324061..64326912
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AA seq
479 aa
AA seq
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MAAVANSLSYSPSPFTKSLKNPSKPFLSKPCVTLKPSFKNLRLTAVVSEKTTTLTPPKAF
DHCFSKSDDGFLYCEGLKVQDAIDSVEKRPFYLYSKPQITRNVEAYKQALEGLDSIIGYA
IKANNNLKIIEHLRKLGCGAVLVSGNELRLALKAGYDPTKCIFNGNGKLLDDLVLAVQEG
VFVNVDSEFDLENIVAASRIAGKKVNVLLRINPDVDPQVHAYVATGNKNSKFGIRNEKLQ
WFLDEVKAHPNELNLVGAHCHLGSTITKVDIFRDAALLMVNYIDQIRAEGFELSYLNIGG
GLGIDYYHAGAILPTPMDLINTVREIVVSRGLKLIIEPGRSLIANTCCLVNRVTGVKTNG
TKNFIVIDGSMSELIRPSLYDAYQHIELVSPSDAEISTFDVVGPVCESADFLGKNRELPT
PSKGTGLVVHDAGAYCMSMSSTYNLKMRPPEYWVEEDGSLVKIRHGETFDDHLRFFECL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtcgccaattcactctcctactctccatcaccattcactaaatctctcaaa
aacccatcaaaaccattcttatctaaaccctgtgtgaccctaaaaccctcattcaaaaac
ctcagactaacagcagttgtatctgaaaagaccacaactctgactccacccaaggccttc
gatcattgtttcagcaaatctgatgatgggtttttgtattgtgaaggtttgaaagttcag
gatgctatagattcagtggaaaagagacctttttatctatacagtaagcctcagattaca
cgaaatgttgaagcatataaacaagctttggaaggtttagattcgattattgggtatgca
attaaagctaacaataacttgaagattattgagcatttgaggaaattggggtgcggagct
gttctggtcagtgggaatgaactgagattggcacttaaagctggatatgatcccaccaag
tgcatatttaatgggaatgggaaattgttggacgatttggttcttgctgtccaagagggt
gtatttgtgaacgtggatagtgaatttgatttggaaaatatcgtggcagcttccaggatt
gcgggaaagaaagttaatgtattgcttaggatcaatcctgatgttgatcctcaggttcat
gcttatgttgctaccggaaacaagaattccaaattcggtattagaaatgaaaagcttcaa
tggtttctagatgaagttaaagctcatcctaatgaattaaacctcgtgggagctcattgc
catcttgggtctaccatcaccaaggtggacatattcagagatgccgctctcctaatggtg
aactatattgaccagataagagctgaagggtttgaactcagctacttgaacattggaggt
ggtctggggatagattactatcatgctggtgctatccttcccacacccatggatctcatt
aacaccgttcgagagatagttgtttccagaggtcttaagctcattattgaacctggtaga
tcactcattgccaacacttgttgccttgttaatcgggtcactggtgttaaaacaaatgga
acaaaaaactttattgtgatcgatggcagcatgtctgaacttatcaggcctagcctttac
gacgcttatcaacacattgaattggtttccccatctgatgctgaaatttcaacctttgat
gtggttggccctgtttgtgagtcggcagatttcttggggaagaatagagaacttcctact
ccatctaagggaactggcttggttgttcatgatgctggtgcatactgcatgagtatgtca
tctacttacaacctgaaaatgagaccacctgaatactgggtggaagaagatggatctctg
gtgaaaatccgccatggagagacttttgatgatcacttaaggttctttgaatgtttgtga
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