Papaver somniferum (opium poppy): 113322306
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Entry
113322306 CDS
T05758
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113322306
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113322306
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113322306
03019 Messenger RNA biogenesis [BR:
psom03019
]
113322306
03041 Spliceosome [BR:
psom03041
]
113322306
Enzymes [BR:
psom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113322306
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
113322306
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113322306
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113322306
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113322306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
DUF316
Motif
Other DBs
NCBI-GeneID:
113322306
NCBI-ProteinID:
XP_026426160
LinkDB
All DBs
Position
11:138527138..138530609
Genome browser
AA seq
320 aa
AA seq
DB search
MPMDEGVLDDIIKRLLEAKNGKTTKQVLITEAEIRQLCVASKEIFISQPNLLELEAPIKI
CGDIHGQYSDLLRLFEYGGLPPEANYLFLGDYVDRGKQSIETICLLLSYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAAIIDEKILCMHGGLSPDLK
HLDQIRNIARPVDVPDQGLLCDLLWADPDKDIQGWGENDRGVSYTFGPDKVAEFLQKLDL
DLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKPTDK
KGKGFGSMSRPGTPPHKGKG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggatgaaggggtgttggatgatataataaagagattattagaagcaaagaac
gggaaaacaacgaaacaagtgttgattactgaggctgaaatcagacagctttgtgttgct
tctaaagagatttttatttctcagcctaatcttcttgaacttgaagctcctatcaagatt
tgtggtgatattcatggtcaatattctgatcttctccggctgtttgaatatgggggtttg
cctcctgaggctaactatctgttccttggtgactatgttgatcgtggtaaacagagcata
gaaaccatttgccttctcttatcgtacaaaatcaaatatccagagaacttctttctactc
agaggcaatcacgagtgtgcttccatcaaccgtatttatgggttttatgatgaatgtaag
aggaggtttaatgtccgtctgtggaaagcttttactgattgctttaactgcttaccggtg
gctgctatcattgatgaaaagatcctttgtatgcatggagggttgtctcctgatctgaaa
cacttggatcagattaggaatattgctcgccctgtggatgtccctgatcaaggccttctc
tgcgatttgctctgggctgatcctgataaagacatccaaggttggggtgagaatgacaga
ggtgtatcttatacgttcggacctgacaaggttgctgaattccttcagaaactcgatctt
gatctcatttgccgagctcaccaggtcgtggaagatggttatgagtttttcgcaaaacga
cagttggtgaccatattctctgccccaaattattgtggggagtttgacaatgctggtgct
atgatgagtgtggatgacacattgacgtgttcgtttcaaatccttaaacccactgataag
aaagggaaagggttcggcagcatgtccagacccggaacaccacctcataaggggaaggga
taa
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