Papaver somniferum (opium poppy): 113322420
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Entry
113322420 CDS
T05758
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37e
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
psom04141
Protein processing in endoplasmic reticulum
psom04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113322420
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113322420
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113322420
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113322420
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113322420
03009 Ribosome biogenesis [BR:
psom03009
]
113322420
03110 Chaperones and folding catalysts [BR:
psom03110
]
113322420
04131 Membrane trafficking [BR:
psom04131
]
113322420
03051 Proteasome [BR:
psom03051
]
113322420
03029 Mitochondrial biogenesis [BR:
psom03029
]
113322420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113322420
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
113322420
Spliceosome [BR:
psom03041
]
Complex B
Other components
Prp19 complex
113322420
Complex C
Prp19-CDC5 complex
113322420
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
113322420
Chaperones and folding catalysts [BR:
psom03110
]
Heat shock proteins
HSP70 / DNAK
113322420
Membrane trafficking [BR:
psom04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
113322420
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
113322420
Proteasome [BR:
psom03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
113322420
Mitochondrial biogenesis [BR:
psom03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
113322420
Exosome [BR:
psom04147
]
Exosomal proteins
Proteins found in most exosomes
113322420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
DACNG
Motif
Other DBs
NCBI-GeneID:
113322420
NCBI-ProteinID:
XP_026426286
LinkDB
All DBs
Position
11:90332878..90335845
Genome browser
AA seq
647 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFSDTTVQGDIKHWPFKVLSGPADKPMIEVSYKGEEKQFAA
EEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
ARNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKK
KVESKNALENYAYNMRNTIKDEKIGAKLTAEDKKKIEDSIEAAIQWLDANQLAEADEFDD
KMKELESICNPIIAKMYQGAGADMGGGMDDEVPAGAGGAGPKIEEVD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaaaggtgaaggacctgctattggtatcgatctaggtactacatactcatgt
gttggagtatggcaacacgatcgtgttgaaatcattgctaatgatcaaggaaacagaact
actccttcatatgttggtttcactgattcagaacgtttgatcggtgatgctgcaaagaat
caggttgccatgaacccaatcaacactgtttttgatgccaagcgtttgattggtaggaga
ttcagtgacacaactgtccagggtgatatcaagcactggccattcaaggttctatctggt
ccagctgacaagcccatgattgaggtctcatacaagggcgaggagaagcaatttgctgct
gaggagatctcatccatggtcttgattaagatgcgtgagattgctgaggcataccttggt
tctacagttaagaacgctgttgttacagtccctgcctacttcaacgattcacagcgtcaa
gctacaaaggatgctggagtcattgctggtcttaatgttatgcgtatcatcaatgagcct
acagctgctgccattgcctatggtcttgacaaaaaggccaccagtgttggagagaagaat
gttcttatctttgatcttggaggtggtacctttgatgtctctcttctaactattgaggag
ggtatctttgaagttaaagccacagccggagacactcatcttggtggtgaggactttgac
aacagaatggtgaaccactttgttcaggaattcaagagaaagaacaagaaggatattagt
ggaaatccaagagctcttagaagattgagaacatcttgtgaaagagcaaagaggactcta
tcatccactgcccagacaactattgaaattgattctttgtttgaaggtattgacttctac
tccaccatcacccgtgccagatttgaggagttgaacatggatctgttcagaaaatgtatg
gagccagttgagaagtgtttaagagatgccaagatggacaagagcactgtccacgatgtt
gtgcttgttggtggatccaccaggattcctaaagttcaacagttgttgcaagatttcttc
aacggaaaggagctttgcaagagcatcaacccagatgaggctgttgcttatggtgctgct
gttcaagctgccatcttgagtggtgagggtaatgaaaaggttcaagatcttttgctattg
gatgttacccctctatctcttggtttggaaactgctggaggtgtcatgactgttttgatc
gctagaaacaccaccatccccaccaagaaggaacaagttttctccacgtactctgacaac
caaccaggtgtgttgattcaagtatacgaaggagagagaaccaggaccagggataacaac
ctgttgggtaaatttgagttgtctggaattcccccagctcctcgtggtgttccacaaatc
acagtctgctttgacattgatgccaatggtatccttaatgtctcagctgaggacaagact
accggacagaagaacaagatcaccatcaccaatgacaaaggtaggttgtctaaggaagat
attgaaaagatggttcaagaggcagagaaatacaagtctgaggatgaggaacacaagaaa
aaggttgaatccaagaatgctcttgagaactatgcttacaacatgaggaacacaatcaag
gatgagaagatcggtgccaagctaacagctgaggacaagaagaagattgaggattcgatt
gaagcagccattcagtggttggatgccaaccaacttgctgaggctgatgagttcgatgac
aagatgaaggagcttgaaagcatctgcaacccaatcattgccaagatgtaccagggagct
ggtgctgacatgggtggaggtatggatgatgaagtccccgcaggagctggaggtgctggt
cccaagattgaggaggtcgactaa
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