Papaver somniferum (opium poppy): 113322453
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Entry
113322453 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113322453
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113322453
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113322453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-Nse
RING_XB3-XBAT31
zf-RING_10
zf-C3HC4_4
zf-C3HC4_3
zf-RING-like
zf-RING_Vps41
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
113322453
NCBI-ProteinID:
XP_026426321
LinkDB
All DBs
Position
11:complement(25310378..25315413)
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AA seq
387 aa
AA seq
DB search
MDETKKTEKYLISPAAFVEGGVQDSCDDACSICLEAFTESDPSTVTTCKHEFHLQCILEW
AQRSSQCPMCWQAISLKDATSQELFTATEQERNFQLRPSRNATIFHHPTLHNFDLPHLSV
GANDSELEERILQHLAAAAAMGRAHHFARRESQRTSSNQGHSPYMVFSPNSDVGPSGPVS
GITSQRRREHERNPLATGVNPSAHLVRNGEEPPQSGSMLPSVRSDQIPGQARSSNLASSR
RRTSFSNTSSASRSSSINRDRAGPSDFQSFSESLKSRLNSVSMRYKESISKGTRGWKERL
FSRSSSIKDLGSEVTREVNTGLASVSRMMERLETRENSRSTDSSELNNLDREDTDVSNQG
VGEGHANTTPISDRNTSVSCAARPGPV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaccaagaaaaccgagaaatatctcatatcccccgctgcttttgtggaaggg
ggagtacaagattcctgtgatgatgcttgcagtatatgtctcgaagccttcactgaaagc
gatccttcaacggtgacaacttgcaagcacgagttccatcttcagtgcatcctcgaatgg
gctcagcgaagttcccagtgccccatgtgttggcaagccataagcctgaaggatgctacc
agccaggaactctttacggcaacagagcaggagagaaacttccaacttcgtccatcccga
aatgccacaatatttcatcatcccaccttgcacaattttgacttaccacatttatcagtt
ggtgcaaatgattccgaacttgaagagcgtatacttcagcatttagctgctgctgccgca
atgggaagagcacatcatttcgctaggagggaaagccagcggacatcttcaaatcaaggt
cattcaccatacatggtgttctcccccaactctgacgttggtccaagtggtcctgtttct
ggcattacttcccaaagaagaagagaacatgagcgaaatccactagcaaccggagttaat
ccgtcagcacatcttgtacggaatggagaagaacctcctcaatctggatcaatgttgcct
tctgttcgatctgaccagattcctggccaagcgagatctagcaatttagcctccagccgg
cgtcgaacctctttcagtaatactagttctgccagtcgatcttcctcgatcaatcgagat
agggctggaccgtctgatttccaatctttttcggagtctctaaaatctcgactcaattca
gtctcaatgagatacaaagagtcgatctcaaagggtacaagaggatggaaggaaaggctg
ttctctaggagcagttccattaaagatcttggttcagaagttacaagagaggtaaacact
ggacttgctagcgtatcacgaatgatggagcgccttgagaccagggaaaacagtagatca
actgattcctcggaattaaataacttggatagggaagatacagatgtgagtaaccaagga
gttggggagggtcatgctaacaccacccctatcagtgataggaatacatcagtttcttgt
gctgcacgtcctggtccagtttaa
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