Papaver somniferum (opium poppy): 113322594
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Entry
113322594 CDS
T05758
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113322594
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113322594
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
113322594
NCBI-ProteinID:
XP_026426507
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Position
11:complement(95873824..95876917)
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AA seq
376 aa
AA seq
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MGTVHSRKHRNGINGSSSQPNPPPYIRTYPPSQPTATATNSEMSCSLPYSNVDSNLRALA
GQAEGFGKCAIGGLNGPIYHVTTLADDGPGSLRDGCRKKEPLWIVFDVSGTICLSSYLAV
SSYKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGHDVDCIQIKPKSKHIWIDRC
SLSDFDDGCIDITRESTDITVSRCHFYKHDKTMLIGADPTHVTDRCIRVTIHHCFFDGTV
QRHPRVRFAKVHLYNNYTRCWGIYAVCASVESQIFSECNIYEAGVAGAKKGTFLYFTEKA
ADKECPSTGFVTSQGDIFLNGAPACPRAGGYCEGNMFHPSEYYPTWTVEPATENLKEILK
LCTGWQNISRPCEKTA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccgttcatagccgtaaacatcggaatggcattaacggttcttcttcacaacca
aaccctcctccttatataaggacttacccgccaagtcaacctacagcaacagcaacaaat
agcgaaatgtcttgttcattgccttactcgaatgttgattctaacttgagagctttagct
ggccaagctgagggttttgggaagtgtgccatcggaggacttaatggacctatttatcat
gtcactacgttagcagatgatggtcctggatcactgcgtgacgggtgtcggaaaaaagaa
cctctttggatcgtctttgacgtttcgggtaccatttgcctttcatcctatttggctgta
tcgtcctataagacaatcgatggtagaggacagcggataaagtttacgggcaagggctta
aggttgaaggagtgtgaacatgtgataatctgcaatcttgagtttgaagggggtagagga
catgatgttgattgtattcaaattaaacctaaatcaaagcatatatggattgatcgctgc
agcctgagtgatttcgatgatgggtgtattgatattacaagagagagcacagatatcact
gtatctaggtgtcatttctataagcatgacaagacaatgcttattggagcagatcccact
cacgttactgatagatgcattcgagtaaccattcatcactgcttctttgatggaactgta
cagcggcatcctcgtgttaggtttgcgaaggttcatctatataacaactacaccagatgt
tggggcatatatgctgtttgtgcaagtgtagaatcacagatattttcagagtgcaacata
tatgaagcaggtgttgcaggtgcgaagaaggggacatttctatatttcacggaaaaggct
gcggacaaagaatgcccctcaactggctttgtaacatctcaaggagacatcttccttaac
ggtgctccagcatgtcctcgagcaggagggtattgtgaaggaaatatgttccatcctagt
gaatactaccctacatggacagtcgaacctgcaactgaaaatctgaaggaaatccttaaa
ctctgtacaggatggcaaaacatatcaagaccctgtgagaagacagcataa
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