Papaver somniferum (opium poppy): 113322602
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Entry
113322602 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai-like
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113322602
04131 Membrane trafficking [BR:
psom04131
]
113322602
04121 Ubiquitin system [BR:
psom04121
]
113322602
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113322602
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
113322602
Membrane trafficking [BR:
psom04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
113322602
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113322602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
YlxR
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
113322602
NCBI-ProteinID:
XP_026426517
LinkDB
All DBs
Position
11:109720958..109723916
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AA seq
460 aa
AA seq
DB search
MLQIRLNKVEGGGGAKPSPADSVTVACPDHLILADLPVAKSIGTASATTHLKAVGRRSRR
HLGERVHFCVRCDFPISIYGRLSPCDHAFCLDCARSDSSCYLCDDRIQKIQTIKMMEGIY
ICAAPHCLKSFLKRSEFEAHIHETHADLLQPNSEKEDGNESDAFTATRPSSADPHAKQQA
APADSLTSRAPSRSGFSPSSNSQPQQPSQQLPKPIIQSKPPPHYNNPPQGFDRPGPFNHF
PQQGGALQRRDSDQFLDKQPGVLSESPYPDYNMHPHQQPNFMMPVNANQGMGLTFTFPPH
FSIGGAQQFYSPHFETARPDLATESGSEQGSLSGFPMPTGGNSQFPENYPRQWNMGHAGV
PMEQQMAVSQGLPEGYTNLGDPQGRPQFFQGDYARGQGGLPMNPNHLNQSGNSQDQKDGK
GVLAAMPLPPPPPSLQHHTQLQQGNFSNTGDSGREGKNCI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaatccgtctaaacaaagtagagggagggggtggtgcgaagccctcaccagcg
gattcagttactgtggcatgtccggaccatctcatacttgcagatcttccagttgctaag
agcattggcacagcaagtgcaactacacatttgaaggctgttggtcgcaggtcccgtcgt
catcttggtgaacgagttcatttctgtgttcgatgtgattttcccatctccatatacggc
cgtttgagcccatgtgatcatgccttctgtctggattgtgcaaggagtgattcgagctgc
tatctctgcgatgatcgaattcaaaaaattcagacgattaaaatgatggaggggatatat
atctgtgccgctcctcactgtctcaagtccttcttaaagaggtccgagtttgaagcccat
attcatgagactcatgctgatcttcttcaacctaattcagagaaagaagatggaaatgaa
tcagatgcttttactgctacgaggccctcatctgcagaccctcatgctaagcagcaggct
gcacctgcagattccttaacttctcgtgccccatctagatctggcttctcaccaagttca
aattctcaaccccagcaacctagtcagcaacttcccaagccaattatacagtcaaagcca
ccaccacattacaataatccgccccaaggttttgacagaccagggcccttcaatcacttc
ccccaacagggtggagcacttcaaagacgggattctgaccagtttttggataaacaacca
ggagttctatcagagtctccatatcccgattacaatatgcaccctcatcaacaaccaaat
ttcatgatgcctgttaatgcaaatcaaggaatgggtctaacatttaccttccctcctcat
ttttctattggaggagctcaacaattctacagtcctcatttcgagacggctcgtccagat
ttggcaaccgaaagtggatcagaacagggttctttatcaggtttccccatgcccacagga
ggtaactcacaattcccagaaaattatccccgacaatggaatatgggacatgcaggggta
ccaatggaacaacaaatggcggtaagtcaagggttaccagaaggctatacaaatctagga
gatcctcaagggagacctcaattttttcaaggtgactatgcacgaggtcaaggaggtctc
cctatgaatcccaatcatcttaatcagagtggtaattctcaggatcaaaaagatgggaaa
ggtgttctggctgcaatgccacttccacccccacctccatctctacagcatcatacacag
ctccagcaagggaacttctcaaatactggcgactcaggccgggagggaaagaactgcatc
tga
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