Papaver somniferum (opium poppy): 113322707
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Entry
113322707 CDS
T05758
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113322707
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113322707
Enzymes [BR:
psom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113322707
Protein phosphatases and associated proteins [BR:
psom01009
]
HAD phosphatases
Fcp/Scp phosphatases
113322707
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113322707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
113322707
NCBI-ProteinID:
XP_026426633
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Position
11:73394117..73396526
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AA seq
628 aa
AA seq
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MAKAELAFTNNAVHKLQLALLEGINDENKLFAAGSLISKKDYEDVVTERSISNVCGYPLC
KNSLPLERPRKGRYRISLKEHKVYDLQETYMYCSSECVVNSLAFGGSLQDERCPVVNSSK
FNEVLKLFEDLSLEEEGLGKKKGDLGLSELRIQEKLDAKVGEGVPSDGWVGGPSNAIEGY
VPKSDSSLKLPEKGGGLKAKSATQKKGKGKAVNEMEFTSSISMGDQLGIPKRPSALKRSS
KTMLEESKVKLNNSIVKSQDEIPEVSYYASKSGSDVNVTDLEEEELCAGIDALLQETALK
SSLKSSGSKKLTRNVTWADEKETDTGNESHGNLCDVQEMGDSQGSAESSGSQTVEDMDSS
VRLASAEACANALKQAAVIVACGESDASHAVSEAGIIILPQHMYGGDTEMVENGLEPESA
PLKWPTKPGVFNLELFDPENSWFEPPPEGFNLSLSPFATMYMALFGWVTSSSLAYIYGRD
EDSQEEFLSVNGRSYPYKIVLSDGRSSEIKHTLSGCLSRALPGLVMDLRLPTPVSFLEQG
MSRLIETMSFIDALPSFRMNQWHLIVLLFVDALSVCQIPGLSSHMTGTRMLTHKVLDGAQ
ISSEEYELLKDHILPLGRLPQFSTQSGA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagctgaattagcttttacaaataatgctgtacacaagctacagcttgcactt
cttgagggtataaacgatgagaacaaactgtttgcagctgggtctttgatttctaaaaag
gattatgaagatgtggtgactgaaaggtcgatttccaatgtatgtggttatcctctttgt
aagaattcgttaccattagagcggcctaggaaagggcggtatcgaatttcgttgaaagag
cataaggtttatgacttacaagagacgtatatgtactgttcttctgaatgtgttgttaat
agtttagcttttgggggtagtttgcaagatgagagatgcccagtagtgaattcatcaaag
tttaatgaggttttgaagttgtttgaggatttgagtttggaagaagagggtttggggaag
aagaagggtgatttgggattgtctgagttaaggattcaggaaaaattggatgccaaggtt
ggggaaggggtgccgtcagatggttgggttggtggtccatcaaatgcaattgaagggtat
gttcccaaaagtgactcatctttgaagcttccagagaaagggggagggttgaaggctaaa
agtgctacgcaaaagaaagggaaaggcaaggcagtgaatgagatggaatttacgagtagt
attagcatgggggatcaacttggcattcctaaacggccttctgctcttaagcggagttct
aaaacaatgttagaggagtcaaaagtaaaattgaacaattcaattgtcaaaagtcaggat
gaaattcctgaagtatcttactatgcgtccaaaagtggttcagatgtgaatgttactgat
ttagaagaagaagagctgtgtgctggaatagatgctctgttacaagaaactgcattgaaa
tcctccttgaagtcttcgggttcaaaaaaattgactcgcaatgttacatgggctgatgaa
aaagaaactgatactggtaatgagagccatggaaacctttgtgatgttcaagagatgggt
gactcgcaaggtagtgctgaaagctcaggtagtcagacagtggaggatatggacagttcc
gtacgtttagcatcagcagaggcatgtgcaaatgctttgaaacaagcagctgtaattgtg
gcttgtggtgaatctgatgccagtcatgctgtatctgaagctgggatcattatcttgcca
cagcacatgtatggaggagacaccgagatggttgagaatggcctcgagccagaatcagcg
cctctcaaatggccaacaaagcctggtgttttcaatcttgagctgtttgatcctgagaac
tcatggtttgaacctccacccgagggctttaacttaagtttatcaccatttgcgacaatg
tatatggcactttttggatgggtaacatcttcttctctggcttatatatatgggcgtgac
gaagattcccaagaagagtttttatctgttaatgggagatcatatccttacaaaattgtc
ttgagtgatgggcgctcttctgaaatcaagcacactctgtctggttgtctttcccgagca
ctgccaggacttgttatggatttaaggctgccgactccagtatccttcctggagcaagga
atgtcccgcttgatagagaccatgtcgttcatcgatgcgcttccgtccttcagaatgaac
cagtggcatctgattgttcttttatttgtggatgctctctcggtatgtcaaattccagga
ctctcatcacatatgacaggtacaagaatgttaacacacaaggttctggatggtgcccag
ataagtagtgaagagtacgagcttttgaaggatcatattcttccacttggtaggctaccc
cagttctctacacaaagtggagcttga
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