Papaver somniferum (opium poppy): 113322842
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Entry
113322842 CDS
T05758
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113322842
Transcription machinery [BR:
psom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
113322842
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_10
GerE
Motif
Other DBs
NCBI-GeneID:
113322842
NCBI-ProteinID:
XP_026426791
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Position
11:complement(131888020..131891228)
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AA seq
513 aa
AA seq
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MGVVSISSSASRTLLRLSEKFAALHSPLKRPLILAFKTDKKKNILITPSEPIRIPVENPK
ESKRLRRSENKPAKRVKAVATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGS
RVVKRRRRYRKKVGEGNKKDGREVNDFVARNPMKKAKRLNLANRIAFRRKEEEEEESVSS
QGYKDSVEERNINRLIREYSVATDHVSMDWKKMKIPPVLPASEHAWLFKLMQPMKALLES
KDVLHKDIGKEPTSNELAAAVNMSSVEVRQHLRVGRAARNKLIKHNLRLVLFAINKYFQE
FANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLSTYGLFWIRHAIMRSMTLSSFTRVSYG
LESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGISLERYHEVMRASQGVISLHARHNTTQ
EEFINGITDFDGDKRSQPALLRLAVDDVLDSLKPKENLVIRQRYGLDGKGDRTLGEIAGN
LNISREMVRKHEVKALMKLKHPTRVDYLRRHIF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgagtatatcgagttcagcttctcggacactattaaggttaagcgaaaag
ttcgcagcattacattctccgttgaaaagaccgttgatcttggcattcaaaaccgataaa
aagaagaacattttgattacaccaagtgagccgattaggataccggtggagaacccaaaa
gagagcaagagattaagaagatcggagaataagcctgcaaaaagagttaaagctgttgct
actgatgaagctccgttttgtactttagacttggattttaatgaagctgctgtcaaactt
gagaatctctataacttgagtccgccatccgatgtttctgatttggaggatattggaagt
cgcgtcgtgaagagacgtcgtcgatataggaagaaagtgggagaaggcaataagaaggat
ggcagagaagtgaatgattttgtggcgaggaacccgatgaaaaaggcgaagaggttgaat
cttgctaataggattgcattcagaaggaaggaggaagaggaagaagaatctgtgtcaagt
caggggtataaagacagtgtcgaggaaaggaatataaataggcttattagggagtattct
gtcgcgacggatcatgtgagcatggactggaagaagatgaaaataccaccagttcttcct
gcttcagagcatgcttggttgttcaaattgatgcaacccatgaaggcgctacttgagtcc
aaggatgtgttacataaagacattggaaaggaacccacttctaatgaattagcagctgca
gttaatatgagttctgtcgaagtacgacaacatttaagggttggtcgagccgcgagaaac
aaactgataaagcacaatctccgcctagttttatttgcaatcaacaaatactttcaagag
tttgcaaatggtgcgaagtttcaagacctttgccaagcaggggcaaagggtctcattgta
gccatagaccgttttgaaccaaaacgaaagtctcaattgtctacatatggtcttttttgg
attaggcacgcaataatgcggtcgatgacgctttcgagttttacacgtgtttcctatggc
cttgaatcggttagagtggaaatccagaaaacgaaattgcagctgatgttcgagctcaac
aggatacctaaggaggaggagatagcggaaaagatgggaatatctctagagagataccat
gaagtgatgagagcttcccaaggtgtcatctcactccatgcaagacataataccacgcaa
gaggaattcatcaatggaattactgattttgatggtgataaacggagtcaaccggctctt
cttaggcttgcagtggatgatgtgcttgactcgctgaagcctaaggagaacttagtgatc
agacagagatatggacttgatggtaaaggtgacagaacacttggagagattgcaggaaac
cttaatatttcaagagagatggttcggaaacatgaagtgaaagcacttatgaagctcaag
cacccaactcgagtagattacctgcgtagacatattttctaa
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