Papaver somniferum (opium poppy): 113322970
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Entry
113322970 CDS
T05758
Name
(RefSeq) protein DAMAGED DNA-BINDING 2-like
KO
K10140
DNA damage-binding protein 2
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03420
Nucleotide excision repair
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113322970
09124 Replication and repair
03420 Nucleotide excision repair
113322970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113322970
03400 DNA repair and recombination proteins [BR:
psom03400
]
113322970
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113322970
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
113322970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
WD40
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
PQQ_3
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
113322970
NCBI-ProteinID:
XP_026426967
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Position
11:114800060..114803175
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AA seq
568 aa
AA seq
DB search
MRPQTRKTSFPRVVIERESDSEESSSSDEEEEVLEDENVGNLVGEEDEEMDEEAIDEGDD
DINKKKMKGKAPITISLKKVCKVCKKIGHEAGFRGATYIDCPMKPCFLCKMPGHTTMNCP
HRVATENGVIPLRGSTSSSLDYVFGRQIRSNIPKIKPAFVIPDQVDCGVIRYHSRRITCL
EFHPTNNNILLSGDKKGQLGVWDFQKIHEKTVYGNIHSCILNNMKFNPANDGTIYGASSD
GTVSCIDLETGLSSQLMDLNPNGWQGPNNWRMLYGMDVNSDKGLVVVADNHGILYYVDMR
SNSKMEKSVLIHKKGTKVVGLHCNPLQPELLLSCGNDHFARIWDMRRLEAESSLASLPHR
SVVNSAYFSPVSGSKILTTSIDNRLRVWDCVFANLDIPSREIVHSHSFNRYLTPFRAEWD
PKDPSESLAVIGRYISENFNDVALHPIDFIDTSTGQLVAEVIDPNITTISSVNKLHPRDD
VMATGSSRSIFIWRPKEKTEHIQEKDENRLVLCGDAGKKSKKGKGGKSDDDESDDDKYNS
KGKNSKSKNVKPRSKNLTTKVLPKKARR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctcaaaccagaaaaactagtttcccaagagttgttattgagagagaatcagat
tctgaagaaagttcatcatcagatgaagaagaagaagttctagaggatgaaaatgttgga
aacctcgttggagaagaagatgaagaaatggatgaagaagccattgatgaaggtgatgat
gatatcaataaaaagaagatgaaaggaaaagcccccatcactattagtctcaaaaaagtt
tgtaaagtatgtaaaaagattggacatgaagctggttttagaggtgctacatacattgat
tgtcccatgaaaccttgttttctctgtaaaatgcctggtcatactacaatgaattgtcct
catagagtagcaacagagaatggggttatcccgttacgtgggagtacgagtagttcattg
gattatgtctttgggcggcagattagaagcaacattcccaagataaaaccggcatttgtg
attccggatcaagtggattgtggagttatcagatatcacagtagacgtataacatgtttg
gagttccatccgactaacaataacattctcctatcaggagataagaaagggcaattggga
gtttgggattttcaaaagatacatgagaagacggtttacggaaatatacattcgtgtatc
cttaacaacatgaagtttaaccctgcaaatgatggaacgatatatggagcatcatcagac
gggactgtcagttgcatcgacttggagactgggttgtcttctcagttgatggaccttaac
cctaatggatggcagggcccaaataattggagaatgctgtatgggatggacgtcaactca
gacaaaggactagtagttgttgctgataaccatggaattctttactatgtggatatgagg
tcaaacagcaaaatggagaaatctgttttgatccataaaaagggtaccaaagtcgtggga
cttcattgtaatcccctccagcctgagcttcttctaagttgtggaaatgatcactttgct
cgtatttgggatatgcgtcgactggaagctgaatcctcccttgcaagtcttccgcatcgc
agtgttgtgaactctgcatatttctcaccggtttctggcagtaaaattcttactacgtcg
attgacaaccgtcttcgtgtatgggattgtgtctttgcaaatttggatatcccaagcaga
gagatagtacacagccacagtttcaaccggtatttgactccttttagagctgaatgggac
ccaaaggacccttcggagtcccttgcagttattggccgctatataagtgagaacttcaat
gatgtagctttgcatcccatcgatttcattgacactagtacgggacagttggttgccgag
gtgattgatccgaacatcaccaccattagttctgtaaacaagttacatcctcgagatgat
gtcatggcaactgggagttcaaggtctattttcatttggaggcccaaggagaaaactgag
cacattcaagagaaggatgagaatagattagttctctgcggagatgctggaaagaagtct
aagaaggggaaaggtggtaaaagtgacgacgatgagtctgatgatgacaagtataactcc
aaaggaaagaactcgaaatccaagaacgtaaaacccagatcgaagaatctgactaccaag
gtattacccaaaaaggctcggcggtaa
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