Papaver somniferum (opium poppy): 113323082
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Entry
113323082 CDS
T05758
Name
(RefSeq) uncharacterized protein LOC113323082
KO
K24155
rabconnectin-3a
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
113323082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113323082
Membrane trafficking [BR:
psom04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113323082
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
113323082
RAVE complex
113323082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_IFT140_1st
M-factor
Motif
Other DBs
NCBI-GeneID:
113323082
NCBI-ProteinID:
XP_026427113
LinkDB
All DBs
Position
11:127273743..127285082
Genome browser
AA seq
2449 aa
AA seq
DB search
MRTTASWSSSSSSLNNVAQSKPTPTIKDHNEEVKFVPVSLIKSEIIPPSPNNSTPSTVDI
LLDFCGFSWVSYGISNLLIISQFPSPFQQQEEALKSPIFRQVVELSSDDQCENVVGALAW
SPLSDGEISVALGNSICILSHQGSFCWRQSEVLVQSSKVEAIKWTGSGDGIVAVGTEVVL
WKRKSRAWEIAWKFSVEQPQNLVSATWTAEGHVATAHYTNESSSSPLSRCVLVSQSDRRN
GVVKTELRHPQPVSMIQWRPSSGIDTHRDVLLTCCLDGTVRLWSDIDNRSAKKSVRDFND
QRTVRPSFHVTAVIEINQSLKGSLGVDTFVTWASDIGGMFDTDGGVDTSFSSDASEFDTT
VKCEWLIVFGAQMLLTYWAVHCLDDVSPLRFPRVTLWRRQELLGSQASSSSFQGSGISNY
LIKAFISRSKLFGPPTVCSLFQLSSDNSMRWLQLDTSGSNENDGSLSLDGHAGNILQVAV
HPCSSDVGIAASLDSNGVLLLWSLSSVSSSTLGIPTLVPPTWKILSKILVRNFSSTYSSL
WWAPLALDEARVLLMSHNEGVDCFIVNIYERAEHNPSCHKLCTIPFTGHSRADGHVKIFA
NPMSSTSEKSLLSDSFMLFGVWMNPFLALSWKIVLHCDNSASNGGDLNELGEDISDSGTW
RRASTFAGKKYGIVVDSCSSNMPDPHCHDRVTSFAIVSTVNLLPSDQLNFNFSCSSPAYH
MATGCADGNVKLWRSISSKSSTLVPELKNLPWGLVGMFSTHQGPVHSLSSGASGQKIASI
SRVDQSENVSTLCIWEPVRTIGAGHFFLEDKISLDEIVVALNWLLVGDGQLLLGVCTKNQ
LRVFAQNKSHRQAFGKAGETLERNIWNCIARARIFPDANDFIWGPKATAVVVHDKYFSLF
SKCLPVEKTLKNDQQKIDSACGTNGRNLLEVADKLSKSLPIYHPEALLLNLYTGNLKRAF
VAVSHLVGYLSAVTNESGYNSSRLSHVVPQIPLSEYFEDSVSTSNASDKGLQWGMNTSFQ
SSSTQSIGGYSLDSNASSNLLGGTSRKSEITGFIESLEKIPEIAAIINMEKSEILAIIDL
LGEVSDPSRSSAYASLDEPARRFWVPVRFQQLCFLRRLGRLPSMDELVIDSGLIAWAFHS
DCQESLLNSVISNEPSWMDLRKLGAGFWFSDVAQLRSRMEKLARLQFLKKRDPKDSALLY
IALNRVQVLAGLFKVSKDERDKPLVAFLSRNFQEEKHKAAALKNAYVLMGKHQLELATAF
FLLGGDPISAISICAKTLGDEQLALVICRLLEGYGGALEQHLISKILLPDATEKGDYWLA
SILEWTSGNYSQCFLKFLDLQSDSLADQSILPSNGAAFLDPKVGQYCQMLTTKNSMKNFV
GESSAALLSRWATLMTSTALNRCGLPLDALECLSSSSYISEDVYQGSNSDIEKPGILPGV
LKTPSNDSSNWLSADVALNLESNIKLDMAVQYISKLMMEHPSWQSTVLTSSECETYKSEL
SVEKFQHNLNLILATFERKFLLNPADLINMILIYSCNDGLSFIGHCMLHNHISQQEPQID
SEGRFLLHPPLPQMFIKATEDVSHLYTLYIMRCSITSFPLNPSSSQLDRLSTCISSELHG
WDTDMQRLLHPLRNLRKIMKLYSSSFGPENLKTFAPIDLLEYYVLFASAWLQRNLKYLIL
IVYPILVAYSDGHTPEIDVASLRKILRQRVEIMTRDSEKRVEDPERQILKHEQAGQAIFP
LPEDERWKIIGACLWRLLAKFTNDQLKSIFNGVEDGNPPIGVSLSTSSRGSTESDGRNTS
EQIKNVPLFLSRLVKRTVARVSSSHIKQLASLLRQKVQKGMPIPTVLWLEQPNQSAPGPL
INHLNQGNDILQLLNKEDGASLIEILWQFSASPKEIREGLEQEKIWWLQSISQNSSKGWS
DIDKGSGSEIENSETSKNDQEVSSNTANGTHGSQENLTLHDSRRKDSAPIKEVTKFLKPM
EIYKKNGQLLEAMCINSIDRQQIAVASNRKGIIFLNSRDEQSRDLADYIWSESDWPKNGW
AGTECTPVPTFVSPGIGLGSSEKGKHLGLGGATVGLGSLARPGRDMTGGGAFGIPGYAGM
GASGLGWGTQQEFEEFADPPATVGNISSRALSSHPSRPLFLAGSSNTHIYLWEFGKERAS
ATYGVLPAANVPPPYALASISSLKFDHYGHRFVTAAFDGTVCTWQLEVGGRSNICPTESS
ICFNNYASDVTYVAGSGSVIAAAGHSSTGANVVIWDTLAPPSTSQASLVCHEGGACSISV
FDNDIGSGSISPIIVTGGKNGDIGLHDFRFIATGKARQRNSNVAESPTHHTRLVTSNQVG
EHNNGMLWYIPKAHLGTITRVATIPHTSLFLTGSKDGDVKLWDAKRSELVFHWPKLHEKH
TFLQPSSRGFGGVVQDAVTDIQVLPHGFLTCGGDGTVKLIQLKDMQYRT
NT seq
7350 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaccgccagttggagtagtagtagtagcagtctcaataatgtcgctcaatca
aaaccaacgccaaccattaaagatcacaatgaagaagtcaaattcgttccagtttcactg
atcaaatcagaaattataccaccatcaccaaacaattcaaccccatcaacagttgatatc
ttactagatttctgtgggttttcatgggtttcttatggaatttcaaatctccttataatt
tctcaatttccttctccttttcaacaacaagaagaagccctaaaaagtccaatttttcgg
caagtggttgaattatcttctgatgatcaatgtgagaatgttgtaggagctctagcttgg
tctccattgtctgatggcgagatctctgttgctttgggcaattccatctgtatattatct
catcaaggtagtttttgttggaggcagagtgaggttcttgtacagtcgtcgaaggtggaa
gcgattaaatggacaggttctggggatggtatagttgcggtcgggactgaggtggtgtta
tggaagagaaagagtagagcatgggagatagcttggaaattcagtgtagaacaaccacaa
aatctggtttcagcgacttggactgcggaagggcacgtcgcgactgcacattacacgaat
gaatcatcgtcgtcgcctctgagtagatgtgtattggtgagtcagagtgataggaggaat
ggggtggtgaaaactgagttacgacatcctcagccggtttcgatgattcagtggaggcca
tcgagtgggatagatacacatagggatgtgcttcttacgtgttgtttagatggaactgtt
aggttgtggagtgatattgataataggagtgcgaaaaaatctgtaagagatttcaatgat
cagagaactgtgagaccgtctttccatgtaacggctgttattgaaataaaccagtctttg
aagggtagtctcggagtagatacgtttgttacatgggcaagtgacattggaggtatgttt
gatacagatggaggagtagacacgagtttctcaagtgatgcttctgagtttgacacaact
gtcaagtgcgagtggttaattgtgttcggagctcagatgttgcttacttactgggctgtg
cactgtctcgatgacgtttctcctttgagattcccaagagtgactctatggaggagacaa
gagttactaggttctcaagctagtagtagtagttttcagggttctggaatatcaaattat
ttgattaaagcttttatctcgagaagtaaattatttggtcctccaaccgtttgctctttg
tttcagttgtcatctgataattccatgagatggttacagttagatacgtcaggatcaaat
gaaaatgatgggtctttgagtttagatggtcatgccggaaatattttacaggttgcagta
catccttgtagtagtgatgttggaattgctgcttccttggattccaacggtgtgctactc
ctgtggtcgctctccagtgtttcaagttctactttgggcataccgactctggttcctccc
acttggaagatattaagtaaaattctagtccgtaatttttcgagtacatattcaagctta
tggtgggctccattagctctggatgaggcacgtgttcttcttatgagccataatgaggga
gttgattgcttcattgttaatatctatgaacgtgcagaacataatccgtcatgtcacaaa
ttgtgcacaatccctttcactggtcatagtcgtgcggatggacatgtcaaaatctttgca
aatccgatgagttcaactagtgagaaatctctactttctgatagtttcatgttgtttggg
gtgtggatgaatccatttctagctctttcatggaaaattgtgctgcactgtgataattcc
gcaagcaatggtggtgatttaaatgagttgggagaagatatttcagatagtggtacatgg
agacgtgcaagtacatttgctggcaaaaaatatggcattgttgttgattcctgctcgtca
aacatgccagatcctcattgccatgatcgagttaccagctttgccattgtcagcacggtc
aatcttttgccatctgaccaactaaattttaattttagttgtagttctcctgcatatcac
atggctactggttgcgctgatggtaatgttaaactttggagaagtatctcttcaaaatca
tcgactttagtgccggaacttaaaaacttaccatgggggcttgtaggtatgttttccacg
catcaaggcccagttcattcactatcttcgggtgcttctggtcagaagattgcaagcata
agcagggtggatcaatcagaaaatgtcagcacactgtgtatatgggaacccgtacgtact
ataggtgcagggcatttcttcttagaagataaaatatctttagatgagatagttgtcgct
ttgaattggttactggttggtgatggtcagttattacttggggtgtgcacgaaaaaccag
cttcgggtatttgctcagaataagtctcatcgccaggcttttggaaaagcaggggagaca
ttggagaggaacatctggaattgtattgctcgtgcccgtattttcccagatgctaatgac
tttatttggggacctaaggcgactgctgtggttgttcacgataagtacttttcactcttc
agtaaatgtttacctgtggagaaaacactgaaaaatgatcagcaaaaaattgattcagct
tgcggaactaatggtcgcaatctgctagaagtggctgataaattatctaaatctttgcct
atatatcaccctgaagctcttctactgaatctatatacagggaatttgaaacgtgcattt
gtagctgtgagtcatcttgtaggatatcttagtgctgttaccaatgagagtggatataac
tcctccagacttagccatgttgttccacagatcccactgtcagaatatttcgaagattct
gtctccactagtaatgcaagtgataagggattacaatggggtatgaatacttcgtttcaa
agtagctcaacccagagcattggaggctatagtttagactccaatgcatctagtaattta
ctgggtggtacttccagaaaatctgaaattactggattcattgaaagtctagagaagatc
cctgagatagcagctatcatcaacatggagaaaagtgagattttggctataattgatctt
cttggtgaagtcagtgatccaagccgttcttctgcttatgcaagtcttgacgaacctgca
agaaggttctgggttcctgtgaggtttcagcaactatgtttcctccggagattaggtaga
ctgccgtctatggatgagttagttatagactctgggttgattgcgtgggctttccattct
gattgtcaagaaagtctattgaattctgttatatccaatgaaccatcatggatggattta
cggaaattaggtgctggcttttggttttctgatgtagcacaactgcgatcaaggatggaa
aagcttgctagattgcaatttctgaagaagagagatccgaaggattctgcactcctatac
atagcactaaatagagtgcaagttttggccggactattcaaagttagcaaagatgaaagg
gataaacccttggttgcatttctttcacgcaatttccaggaggaaaaacacaaggcagct
gcattgaagaatgcttatgttctgatgggaaaacatcagctggagcttgcaactgctttt
tttctgcttggcggtgatcctatttctgccatctccatctgtgctaagacccttggggac
gagcagcttgcacttgtaatatgtcgtcttctggaggggtacggcggggccctagagcag
catcttatatcgaagattctgcttccagatgcaactgagaaaggagactactggttagca
agcattcttgagtggacttcagggaattactcgcaatgctttctgaagtttcttgacctc
caaagtgattcattggccgaccagtcaattctcccatcaaacggagctgctttcttagac
cctaaagttggtcaatactgccaaatgctaactacgaaaaatagcatgaagaattttgtt
ggggaatcatcagctgcactactgtctcggtgggctacattaatgacctcaactgcctta
aacagatgcggacttcctcttgacgcactggagtgcctttcatcgtcttcatatatttcc
gaggatgtgtatcaaggaagcaactcagacattgagaagcctggaattcttcctggagta
ttgaagacaccctcaaatgattcctctaactggctgtcagcagacgtggctttgaattta
gagtctaacattaagttggatatggctgtgcaatatatctcaaaattgatgatggagcat
cctagctggcaaagcaccgttttaacgagcagtgagtgtgagacttacaaatctgagttg
tcagttgagaaattccagcacaacctgaacctgatactcgcaactttcgaacgcaagttt
ctgttgaatcccgccgatctgattaacatgatcttgatctattcgtgcaatgatgggttg
tcatttatcgggcactgtatgttacacaaccatatatctcaacaagaacctcagatcgat
agtgaaggccgtttccttcttcaccctcctcttcctcagatgtttatcaaggcaactgaa
gatgtatctcatttatacaccctgtatatcatgcgatgcagtattacttcctttcctctg
aatccaagttcctcacagctcgataggctcagcacttgtatctctagtgagttacatggt
tgggatactgatatgcaacgcctcctacaccccctaaggaatttaagaaagattatgaaa
ctttattcttctagtttcggtccagaaaatcttaaaacctttgcacccattgatcttcta
gaatattatgtgctttttgcttcagcgtggcttcaaagaaatttgaaatatctcattctg
attgtttatcctatactggtggcatattctgatggccacactccagaaattgatgtggct
agtctgagaaagatcctccgacaaagggtagagataatgactcgtgattcagaaaaaagg
gtagaagatcctgagagacagatactgaaacatgaacaagcgggacaggcaatatttcct
ctaccagaagatgaaagatggaagattatcggggcttgtctgtggagacttttggccaag
ttcaccaacgatcagctaaaatcaatattcaatggtgtggaagatggtaatcctcccatt
ggagtttcgttgtcaacatctagccgtggaagtactgaatctgatgggagaaacacgtcg
gaacagatcaaaaatgtcccattatttttgtctagattagtgaagagaacggttgcacgt
gtttcctcatctcatattaaacagcttgcatcactcttaagacaaaaggtacaaaaaggt
atgcccataccaactgttttgtggttagagcaaccgaatcaatctgcacctggacccttg
atcaatcatctcaatcagggaaatgatatcttgcaactacttaataaagaagatggagct
tcgttgattgaaattttatggcaattctctgctagccctaaagagatacgtgaaggttta
gaacaagagaaaatatggtggttgcaatctattagccagaattcctctaaaggttggagt
gatatagataaaggcagcggcagtgagatcgaaaatagtgaaacttcgaagaacgatcaa
gaagttagcagtaatactgcgaatggtacccatgggtcacaagaaaatcttactttacac
gattccagacgtaaagattccgctcctattaaggaggtcacaaagtttctgaaaccaatg
gagatttataagaaaaatgggcagcttctagaggcaatgtgcataaactctattgatcga
cagcaaattgcagtagctagcaaccgaaagggaataatttttctcaactcgagagacgaa
caatccagagatctggcagactatatctggtcagagtctgactggcctaagaatgggtgg
gctgggaccgaatgtacaccagttccaacatttgtttctcccggcatcggacttggtagt
agtgaaaagggaaaacatcttggcttgggcggagcaactgtcggcttaggttcattggca
agaccagggagagatatgactggtggtggagcatttggaattccaggttatgctggtatg
ggtgcttctggattaggttggggtacacaacaagagtttgaggagtttgccgacccaccg
gcaacagttggaaacattagctcgcgggctctttctagtcacccttcaagaccattattc
ttggccggatccagcaacacacatatctatctttgggagtttggcaaagagagagctagt
gcaacctatggtgttctgcctgctgcaaatgtaccaccaccatatgcacttgcctcaata
tcatcgttgaagtttgaccactatggacatagatttgttactgctgcttttgatggcacc
gtatgcacgtggcaacttgaggttgggggaaggagtaatatctgccctacagaatcatct
atctgctttaacaattatgcatcggatgtcacgtatgtggctgggagtggatcagtcatt
gctgcagcagggcatagttcgactggtgctaacgtagttatatgggacacattggctcca
ccttccacctctcaagcttcgcttgtatgtcatgaaggtggtgcatgttcgatctctgtg
tttgacaatgacatcggaagtggttctatatctccaattatcgtaactggtggaaaaaat
ggtgacattggtctgcatgacttccgtttcattgcaactggaaaggcgaggcagagaaat
tcaaacgttgctgaatccccgacacaccacacaagattagtgacttcaaaccaagttggg
gaacataataatggaatgctttggtatatacccaaggctcacctaggaactattaccagg
gtagctaccatcccgcataccagcttgttcttaacaggaagcaaagatggtgatgttaaa
ctctgggatgcgaaacggtctgagctagttttccactggccaaaattgcatgagaaacac
acatttttacaaccgagctccaggggatttggtggagttgttcaggatgctgtcactgat
atccaagtccttcctcatgggtttctgacatgtggcggggatggcaccgtaaagcttatc
caactcaaagacatgcaatacagaacgtga
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integrated database retrieval system
