Papaver somniferum (opium poppy): 113323087
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Entry
113323087 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113323087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113323087
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113323087
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
113323087
BRITE hierarchy
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
DZR
Motif
Other DBs
NCBI-GeneID:
113323087
NCBI-ProteinID:
XP_026427123
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All DBs
Position
11:128680201..128683555
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AA seq
320 aa
AA seq
DB search
MEMDNIECVSSSDGGGGMEEEDIRTHNHNHNNQFSSSKGLNNNGISPAATSVHELLECPV
CTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYGS
LGCPEIFPYYSKLKHEALCNFRPYNCPYAGSECAVVGDIPFLVTHLRDDHKVDMHTGCTF
NHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARNY
SYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG
RIWKEQQNQEAGVCIPNLCS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggagatggataatattgaatgtgtatcttcatcagatggtggaggagggatggaagaa
gaagatataagaacccataatcataatcataataatcaattttcatcatcaaaagggtta
aataataatgggatttctcctgctgctacaagtgttcatgaattgcttgaatgtcctgtt
tgtactaattctatgtacccacctattcatcagtgccacaatgggcacacactgtgctcg
acatgtaaaacaagggtacacaaccgctgtcctacttgtagacaggagcttggagatatc
aggtgtttagcattggagaaagtagctgaatcccttgagcttccctgcaagtatggctcc
ctgggatgcccagagatatttccctactacagtaagctcaagcatgaggctctgtgtaac
ttcagaccttataactgtccttacgctggatcagagtgtgctgttgttggtgatattccg
tttttggtcacccatctgcgagatgatcataaagtagacatgcacactggatgtacattc
aaccatcgatatgtgaagtctaatccccgtgaagttgaaaatgctacctggatgttgact
gtcttcaactgtttcggtcagtacttctgcctgcattttgaagcgttccaactcggaatg
gcccctgtttacatggcattccttcgcttcatgggagacgaaaacgacgcgaggaactac
agttacagtttggaagtaggagcaaacggaagaaaactcatttgggaaggtacaccacgg
agcattcgcgatagtcacaggaaagtcagagacagccacgacggactcataatccagcga
aatatggcactatttttctccggcggggacaggaaagagctgaagcttagggtgacaggg
aggatatggaaggaacaacaaaaccaagaagctggggtgtgcataccaaacctttgtagt
tga
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