Papaver somniferum (opium poppy): 113323088
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Entry
113323088 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113323088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113323088
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113323088
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
113323088
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
DUF7567
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
113323088
NCBI-ProteinID:
XP_026427124
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All DBs
Position
11:128664753..128667222
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AA seq
310 aa
AA seq
DB search
MEMDNIECVSSIEEGGEDIHQHHQFGSSKPLINNLISPATSVYELLECPVCTNSMYPPIH
QCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLQLPCRYGSLGCPDIFPYY
SKLKHEALCNFRPYNCPYAGSECAIVGDIPSLVTHLRDDHKVDMHTGCTFNHRYVKSNPR
EVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYCYSLEVGANG
RKLIFEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNQE
AGACIPNLCS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggataatattgaatgtgtatcatcaattgaagaaggaggagaagatattcat
caacatcatcaatttggttcttcaaaacctttaattaataatttgatttctcctgctaca
agtgtttatgaattgctggaatgtcctgtttgtactaattctatgtacccacctattcat
cagtgtcacaacgggcacacgctatgttctacatgtaaaacaagggtacataaccggtgt
cccacttgtagacaagaacttggagatatcaggtgtttagcgttagagaaggttgccgaa
tcccttcagcttccctgcaggtatggctcgctggggtgtcctgatatatttccgtattac
agtaagctcaagcatgaggctttgtgcaactttagaccatacaactgcccctatgctgga
tcagagtgtgctattgtaggcgacattccgtctctggtcacccatcttagagatgatcat
aaggtagatatgcacactggatgtacgttcaaccatcgatatgtaaagtctaatcctcgt
gaagttgaaaatgctacatggatgttgactgtcttcaactgtttcggtcagtacttctgc
ctacactttgaagccttccagctcggaatggcccctgtttacatggccttcctccgcttc
atgggagacgaaactgatgccaggaactactgttatagtttggaagtaggagcaaatggt
aggaaactcatttttgaaggtacaccgcggagcattcgcgatagtcacaggaaagtcaga
gacagccacgacggactcatcatccagcgaaacatggctctctttttctctggtggagat
aggaaagagctgaagcttagggttacagggaggatatggaaagaacaacagaaccaagaa
gccggggcgtgcatcccaaacctttgtagttga
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