Papaver somniferum (opium poppy): 113323270
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Entry
113323270 CDS
T05758
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113323270
03400 DNA repair and recombination proteins [BR:
psom03400
]
113323270
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113323270
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Atypical E3
113323270
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
113323270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
zf-HC5HC2H
SLX1_C
Baculo_IE-1
zf-RING_2
DASH_Dad1
zf-ANAPC11
PHD_NSD
DUF4632
PHD
Motif
Other DBs
NCBI-GeneID:
113323270
NCBI-ProteinID:
XP_026427343
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All DBs
Position
11:complement(61310304..61314277)
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AA seq
338 aa
AA seq
DB search
MPNLSWRHHALIQTLLSRGPLKEDEFLSIFAVVSGKKQALDSSDKEFSDYLLNITKELAF
VRFELRAFRNQYDGEVYYGVVNNVADEQAKLGTKYTVPQIAFYKGIIEAIAQDTTASGCI
TNIDALNIRLENQNGIGSQSPSGTSTVPYAFKNFTISQKDKTIDELVQDRWLCSIPDGKI
GLGVRSFLDLRSWFRSNDVTSCEICNEAGVKAELCQKEDCNTRIHHYCLKKKFSQRMAEK
VCPSCGTEWPSGSIFEEAKEDEGEEEDRGEPSQYQAAEPSSAGMRKKRRSVKSERVDTVG
EGRRRTSEPVQELRRTTRQTSEPVQKLKRTTRSAAQRR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatttgagctggagacatcatgcgctcatacaaactcttttatctcgcggccct
ctcaaggaagatgaattcctttcaatcttcgccgtcgtcagcgggaaaaaacaagcttta
gattcgagcgataaggaatttagtgattatcttttaaacataaccaaggaacttgcattt
gtacggtttgagttgcgtgctttcagaaaccagtatgatggagaagtttattatggtgtg
gtaaataatgttgctgatgaacaggccaagcttgggactaaatatacagttcctcaaatt
gccttctacaagggtattatagaagcaattgcgcaggacacaacagctagtggttgcata
acgaatattgatgctctcaatatccgcttagagaatcagaatggaataggatcacaatca
ccgagtggcacatctactgttccctatgcattcaagaatttcactatatctcaaaaggat
aaaacgatagatgaacttgtgcaagatcggtggctttgctccatccctgacggcaaaatt
gggcttggtgttagatccttcctcgatcttcggagctggtttcgaagtaatgatgttaca
tcatgtgaaatttgcaacgaggcaggagtgaaggctgagttgtgccaaaaggaggattgt
aacactagaattcaccactactgtttgaagaagaagttttctcaaagaatggctgaaaaa
gtttgtcctagttgtggcactgaatggcccagtgggtccatatttgaggaagcaaaggaa
gacgaaggggaggaagaggatcggggtgaaccaagtcaataccaagctgcagagccttct
tcagctggcatgagaaagaagcgtcgaagtgtcaaatccgaaagggtagatactgttgga
gaaggccgtcgccgaacatctgaacctgttcaggagcttaggagaaccactcgccaaaca
tctgaacctgttcagaagcttaagagaaccactagaagtgctgcacaacgaaggtaa
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