Papaver somniferum (opium poppy): 113323849
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Entry
113323849 CDS
T05758
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113323849
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113323849
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
113323849
NCBI-ProteinID:
XP_026427975
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Position
11:complement(78106961..78110615)
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AA seq
331 aa
AA seq
DB search
MAVSLRCLSLCLVTLLLFVILIMADQVEKKENSDLRIQQQTKQLQSSTINTTTMADLRPE
EEWTHEHAVADPDEVASQVATTIRNSTERRNLGGYFSCGSGNPIDDCWRCDKDWHKNRKR
LADCGIGFGRKALGGRDGDYYVVTDPSDHDAVNPKPGTLRHAVIQDKPLWIVFKRDMVIT
LKQELIMNSFKTIDGRGVNVHIANGACITIQYITNVIIHGIHIHDCKPTGNALVLDSPSH
YEYRSLSDGDGISISGSSHIWVDHNSLSNCADGLIDAIMASTAITISNNYFTHHNEVMLL
GHDDSYTRDKVMQVTIAFNHFGEGLRQRMPR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctttgaggtgtttaagcttatgtctggttactctattactgtttgttata
ctgataatggctgatcaagtagagaaaaaggagaactctgatttgaggattcaacaacaa
acaaagcaattacagagctccacaataaacacaacaacaatggcggatttaaggccagag
gaggagtggacccatgaacatgcagtagctgatcctgatgaagttgcttcccaagtagct
acgactatacgtaatagtactgaaaggaggaacctgggcgggtatttctcatgtggaagt
ggcaatccaattgatgattgctggcgctgtgacaaagactggcacaaaaacaggaagcgt
cttgcagactgtggtatcggttttgggcgtaaagctcttggtggtcgagatggagattac
tatgtcgtcactgacccaagtgatcacgacgctgtgaatcccaaaccaggaaccctgcgt
catgcagtcattcaggacaaaccactttggattgtgttcaagcgtgacatggtcatcact
ctcaaacaagagcttatcatgaatagtttcaagaccattgatggccgtggtgtcaatgtt
catatcgcaaatggagcttgcatcactattcagtacataaccaatgttatcattcatgga
atccacatccacgactgtaaacccactggtaatgctttggttctagactccccgtctcac
tacgaatatagatcattgtctgatggtgatggtatctccatttctggatctagccatatc
tgggttgatcacaactcactctccaactgtgctgatggtcttattgatgctatcatggct
tccactgccatcactatctctaacaattacttcactcaccacaatgaggtgatgctgctg
ggtcatgacgactcgtataccagagacaaggtaatgcaagtaaccattgcattcaatcat
tttggtgagggtctcaggcaaaggatgccaaggtaa
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