Papaver somniferum (opium poppy): 113325377
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Entry
113325377 CDS
T05758
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113325377
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113325377
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
113325377
NCBI-ProteinID:
XP_026429354
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Position
11:complement(78097521..78101172)
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AA seq
330 aa
AA seq
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MAVSLRCLSLCLVTLLLFVILIMADQEKKENSDLRIQQQTKQLQSSTINTTTMADLRPEE
EWTHEHAVADPDEVASQVATTIRNSTERRNLGGYFSCGSGNPIDDCWRCDKDWHKNRKRL
ADCGIGFGRKALGGRDGDYYVVTDPSDHDAVNPKPGTLRHAVIQDKPLWIVFKRDMVITL
KQELIMNSFKTIDGRGVNVHIANGACITIQYITNVIIHGIHIHDCKPTGNALVLDSPSHY
EYRSLSDGDGISISGSSHIWVDHNSLSNCADGLIDAIMASTAITISNNYFTHHNEVMLLG
HDDSYTRDKVMQVTIAFNHFGEGLRQRMPR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctttgaggtgtttaagcttatgtctggttactctattactgtttgttata
ctgataatggctgatcaagagaaaaaggagaactctgatttgaggattcaacaacaaaca
aagcaattacagagctccacaataaacacaacaacaatggcggatttaaggccagaggag
gagtggacccatgaacatgcagtagctgatcctgatgaagttgcttcccaagtagctacg
actatacgtaatagtactgaaaggaggaacctgggcgggtatttctcatgtggaagtggc
aatccaattgatgattgctggcgctgtgacaaagactggcacaaaaacaggaagcgtctt
gcagactgtggtatcggttttgggcgtaaagctcttggtggtcgagatggagattactat
gtcgtcactgacccaagtgatcacgacgctgtgaatcccaaaccaggaaccctgcgtcat
gcagtcattcaggacaaaccactttggattgtgttcaagcgtgacatggtcatcactctc
aaacaagagcttatcatgaatagtttcaagaccattgatggccgtggtgtcaatgttcat
atcgcaaatggagcttgcatcactattcagtacataaccaatgttatcattcatggaatc
cacatccacgactgtaaacccactggtaatgctttggttctagactccccgtctcactac
gaatatagatcattgtctgatggtgatggtatctccatttctggatctagccatatctgg
gttgatcacaactcactctccaactgtgctgatggtcttattgatgctatcatggcttcc
actgccatcactatctctaacaattacttcactcaccacaatgaggtgatgctgctgggt
catgacgactcgtataccagagacaaggtaatgcaagtaaccattgcattcaatcatttt
ggtgagggtctcaggcaaaggatgccaaggtaa
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