Papaver somniferum (opium poppy): 113326786
Help
Entry
113326786 CDS
T05758
Name
(RefSeq) protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113326786
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
113326786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_16
TPR_12
TPR_14
TPR_19
TPR_17
TPR_11
TPR_6
TPR_7
TPR_CcmH_CycH
TPR_9
ANAPC3
ARM_TT21_C
TPR_10
TPR_4
Fis1_TPR_C
RPN7
ARM_TT21_5th
HAT_PRP39_C
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
113326786
NCBI-ProteinID:
XP_026430224
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
MACVYIPVQNSEEEVRVTLDSLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKTKQFL
EILEEGAGPEIDEYYADMKAERIAILNALGAYYSYQGKIETKQREKDEHFVMATQYYNKA
SRIDMLEPSTWVGKGQLLLAKGDTDQASSTFKIALQGNPKNVSALLGQACVEFSLNRYTE
SLDLYKRALQVHPNCPAAVRLGIGLCRYKLGQFEKARQAFQRVLQLDPENVEALVALGIM
DLQANDGSGIRRGMEKMQRAFEIYPYSAMALNHLANHFFFTGQHFLVEQLTETALAVSDH
GLMKSHSYYNLARSYHSKGDFEKAGFYYMASVKESSRPQDFVLPYYGLGQVQLKLGDFRS
SLANFEKVLEAYPDSVESMKAVGHIYVQLGQTDKALEILRKATKADPRDAQAFLELGELL
IAYNPGAALDSFKTARGLLKKGGEEVPIELFNNIGVLHFEKGEFELAQQTFKEALGDGVW
RDFLDGKLHSSVAITHQYNDMKIFQQLQEKGVSVELPWNKVTTLFNQARLLEQLHETEKA
TILYRLILYKYPEYADASLRLAAIAKARNNIPLSIALIGDALKVNEKCPNALSMLGSLEL
KSDDWVKAKDTFRAAKEATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKAKELY
TKVLVQRPANLYAANGTGVVLAEKGQFDVSKDIFTQVQEAASGSIFVQMPDVWINLAHVY
FAQGQFAQAVKMYQNCLRKFYYNTDTQILLYLARTHYEAEHWQDCKKTLLRAIHLAPSNY
TLRFDAGVSMQKFSASTLQKTKRTADEVRATVAELKNAVRVFSQLSAASSLQFHGFDEKK
IETHVGYCKHLLEAAKVHCEAAEREELQNRQRLEVARQVSLAEEARRKAEEQRKLQLEKR
KQEDELKQVRQQEEQFRRVKEQWRSSAPSKRKERANADDEEGGGEKRKKKGGKRRKHEKK
SHYEMDDNEADMGDEHEEYTNVNTRDTMNRMMDDEDDNGEDVAQDLAAAGLEDSDVEDEA
AASKVNKPRQAWSESDDDEETTQRRREISADPPSDGEVR
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtgtgtacattccagttcaaaactcagaagaagaagttagggttactttagat
tcattaccaagagatgcttctgatatccttgatatccttaaagctgaacaagctcctctt
gatctctggctcattatcgcgagggaatacttcaaacaaggaaaaaccaaacaattcctg
gaaatattggaggaaggggctgggccagaaattgatgagtattatgctgatatgaaggcg
gagcgcattgcaatattgaatgcattgggggcttactatagttaccaaggaaaaattgag
actaagcaaagagaaaaagatgagcatttcgttatggcaacacagtattataataaagct
tcgaggattgacatgcttgagccttcaacttgggttggtaaaggtcagcttttattggct
aagggtgatacagaccaagcatcttcaacatttaagatcgcactgcaaggaaatcctaag
aatgtgtctgccctgcttggacaggcatgtgttgagttcagccttaaccgttacacagag
tctttggacttatataagagggcattgcaagtgcatcccaattgtcctgcggctgtaagg
cttggaataggtctctgtcgctacaaacttggacaatttgaaaaagctcggcaagctttt
caacgtgttcttcagttagacccagagaacgttgaggctcttgtggcacttggaatcatg
gacctgcaagcaaatgacgggagtggaattcgcagaggaatggagaaaatgcaaagagct
tttgagatatacccctattctgcaatggctttaaatcatttggcaaaccattttttcttt
accggtcaacattttctggtcgagcaattgactgaaactgcacttgctgtaagcgatcat
ggtctgatgaagtcacattcatactacaatttggcaagatcgtaccatagcaagggcgat
tttgaaaaggctggattctactatatggcatctgttaaggaaagcagtaggcctcaagat
tttgtattgccttattatggcttgggacaagtccaactaaagttgggagatttcaggagt
tcacttgcaaactttgaaaaggttttggaggcctatcctgatagtgttgaaagcatgaaa
gctgttgggcacatttatgttcagcttggccagactgacaaagcattggaaatcctgcga
aaggcgacaaaggctgatccacgagatgcacaggcgtttctggagctgggtgaattgtta
attgcatataatccaggagctgcgttagattccttcaagacagcacgtggtcttctaaaa
aaaggtggtgaagaagtgccaattgaactgttcaacaatattggagtacttcattttgag
aaaggagagttcgagctagctcaacagacttttaaggaagcactgggtgatggagtttgg
cgtgatttcttggatggtaaactacacagttcagttgcgatcactcatcagtataatgac
atgaagatattccaacaacttcaagaaaaaggtgtttctgtggaattgccatggaataaa
gtcacaacactgtttaatcaggctagactacttgagcaattgcatgaaactgaaaaggca
actattttgtaccgtctgatcctttataagtatcctgaatatgcggatgcatctctgagg
cttgctgctattgctaaagcaagaaataatattccactaagcatagcattgattggagat
gctctcaaggtgaatgagaagtgtcccaatgctttgtcgatgcttgggagcttagagctt
aaaagtgatgattgggtcaaggcaaaggatacattccgggctgccaaagaagcaactgat
ggaaaagattcatatgctactctctccctgggaaactggaactactttgctgctgtgcgt
tctgagaaaagaggtcctaaattggaagcgacacatctggagaaggctaaagagctctac
actaaagttttggttcaacgtcctgcaaatttatatgcggcaaatggtactggagtggtc
ttagcagaaaagggccagtttgatgtttcaaaagatatttttacccaggtccaagaagct
gcaagtggaagtattttcgtccaaatgcctgacgtctggataaatttagctcatgtttat
tttgctcaagggcagtttgctcaggccgtgaaaatgtatcaaaattgcttgaggaaattt
tactataatacggacactcaaattcttctctatctggcccgcactcattacgaggctgag
cattggcaagactgtaaaaagactttgttgagagccatccacttggcaccatcaaattac
actctgcggtttgatgcaggagtttcaatgcaaaagttttctgcgtctactctacagaag
acaaagaggacggctgatgaggtacgtgcaacagtagcagagttgaagaatgcggtccgt
gtgtttagccaattatctgcagcatccagccttcagttccatgggtttgatgagaagaaa
atagaaacccatgttggatactgcaagcatttacttgaagctgcaaaggttcattgtgaa
gcagctgaacgtgaagagctccagaaccggcaaagactagaagttgcccgtcaggtgtcc
ttagctgaggaagcccgtcgaaaagccgaagaacaacgaaaattacagttggaaaagaga
aaacaagaagacgagttgaagcaagtgaggcagcaggaggagcaattcaggcgtgtaaag
gagcaatggaggagtagcgctcctagcaagcggaaggaaagagccaatgctgatgatgaa
gagggtggtggagagaagaggaagaagaaaggtgggaagagaagaaagcatgaaaagaaa
tcacattatgagatggatgataatgaagctgacatgggggacgagcacgaggaatataca
aacgtaaatactcgtgataccatgaatcgaatgatggatgatgaggatgataacggggaa
gacgttgctcaagatcttgctgcagctgggctcgaggactctgatgtcgaagatgaagcg
gctgcatctaaagtaaacaagccgagacaagcatggtcagaatctgacgatgatgaagag
acaacacagaggcggagagaaatttcagcagatcccccgagtgatggagaagtgagatga
DBGET
integrated database retrieval system
