Papaver somniferum (opium poppy): 113327524
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Entry
113327524 CDS
T05758
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
psom04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113327524
04120 Ubiquitin mediated proteolysis
113327524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113327524
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113327524
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
U-box type E3
113327524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
113327524
NCBI-ProteinID:
XP_026430496
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MATGKAKRSPEVIEDILIQRIFLVTLTDVDNKQLMYLESMAAENLRQGKSLLLNPDLMDE
VLFGILSGQFTGESLFKYLTGCYGRAFKEGKKIGNMKDIDLQSSLLNGVVERAKKLVANY
CRTYLHNPDMFPNSEKISAGSAILPIIFSAVSKNSTACGNEFLNEFFTDPDGYDSMAPIF
KDLYDSLNHEISKVNDSPLGNFVQPLNALRMLVRFPNGGKALVSHPSWLPKGEAVNGRVI
EKESILGSFFHISDLTDVMIGGELDDQLVDSSTSHVYDVSSTNLPAIMSNLHDGLEDVLL
CLLNSKDTRERVLEYLGDVIEKNSSRAHMNIDKVTCASSGMFVNLSVVMLRLSNPFINEL
EKRDKIDAKYVSNGTHLNLRRLTPLHASEEEIGAWADENKSKSGNSRYSFICECFFMTAR
VLNLGLLKGINECKNLTRDLSEYTKLLSEQVKQPPSPYFQDEIARLNKIIDLVSDEKSSY
EFQLDINIQQALSFYRLMIVRLVDFAGGFKMPLPSSCPMEFGCMPEHFVDDAMELFIFAS
EAMRERLDPFLLNDFMNFIIMFIARPNYIRNPYLRTKMVKGLNYWTPKRSDSDTAVTPFQ
GHQVAPVSPFQGYRLALGQYLVESVLKLYVDIESTQFSEKFYIRNEITQHLKYLWGEPSH
LDAWKKFAKEEEKGVYLNFLNFLINDSIYLQDEGFNKIRELKEKEKEGKVHPWEENEVRE
YIRLALEDINMLAFTSEQITAPFLLPQIVDRIANMLNYFLVQLVGPKRISLESAEKYGFK
PRILLKKIISIYVHIARDDKENTFAAAICKDGRSYNEKLFTEVVNIPGLGEEMTALGEFV
NLSAKVKLAAIAEMDVEASLGEIPDEFLDPIQCTLMKDPVTLPSSKVTVDRLVIKRHLLS
DSKDPFNRSYLTQDMLIPDVQLKSQIDEFIKSRTQPTPSSSNNITQSTGIF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggctacaggaaaggcaaagcgatccccagaagtgatagaagatattctaatacaaaga
atcttcttagtcacgttaacagatgttgacaataaacagttgatgtatttagagagcatg
gcagctgagaatctccgccaaggcaagtcacttctgctgaatcctgatctgatggatgaa
gttctttttggtatactttcaggtcagtttactggtgaatcgctgtttaaataccttaca
ggatgttatggtcgtgctttcaaagaaggtaagaagattggtaatatgaaggatatcgat
ctgcagtcttctttattgaatggtgttgtagaacgagctaagaaattagttgctaactat
tgccggacttacttgcataacccagatatgtttcctaacagtgaaaagatatcagcaggt
tctgctatattgccgataatcttttctgcagtttcaaaaaatagtacggcatgtggaaac
gagttcttgaacgagttttttacagatcctgatggttatgatagtatggctccaattttt
aaagatttgtatgatagtttgaaccatgagataagtaaagttaatgattcgccacttgga
aattttgttcaacccttaaatgctttaaggatgttagtgcgttttcctaatggtggaaaa
gcattggtaagtcacccttcgtggttacctaagggtgaagctgtgaacgggcgcgtaatc
gagaaagagagtatactgggttcttttttccatattagtgatctgactgacgtgatgatt
gggggggagcttgatgatcagctcgtagattcctcaacatctcacgtatatgatgtttca
tctacaaacttacccgcaattatgagtaacttgcacgacgggcttgaagacgttctttta
tgcttgctgaatagtaaggatacacgagagcgtgttctggagtatttgggcgacgtcatc
gagaaaaattcttctagggcgcacatgaacattgataaggtaacttgtgcaagttcaggc
atgtttgttaatctcagtgtagtgatgctccggcttagtaacccgttcataaacgagtta
gaaaagagagacaagatagacgcgaagtatgtgtctaatggtactcatttgaacttgaga
agactaactcctcttcatgcatccgaagaagaaattggggcgtgggctgatgaaaataag
tcgaagtctgggaatagtcggtatagttttatatgcgagtgtttttttatgactgctagg
gtccttaacttgggtttactcaaaggtataaatgagtgcaaaaatcttactagagacttg
tcggagtatacaaaactactttccgaacaggtaaagcaacctccctctccttatttccaa
gatgagatagcacgcctcaataaaataattgatttggtatctgatgaaaagtctagttat
gagtttcagctagatattaatattcagcaggcattgtctttctaccggttgatgatcgtt
cggttggtagattttgctggagggtttaaaatgcctttgccatcgagttgccctatggag
tttggttgtatgcctgaacactttgtcgatgacgcaatggagttgtttatatttgcctct
gaggctatgcgtgagagattggatccattcttgctgaacgattttatgaacttcattatc
atgttcatcgcacgcccgaattatatcagaaacccttatctcagaaccaagatggttaaa
ggcttgaactattggacgcccaagagaagtgattctgatacagcagttaccccttttcaa
ggccatcaagtagctcctgtttccccttttcaaggctatcgattagctcttggtcagtat
ctggttgaatctgtgttgaagttatatgtcgacattgagtctactcaattttcagagaaa
ttctacatacgtaatgaaatcacacaacatctcaagtacttgtggggagaaccaagccat
ctggatgcatggaagaaatttgccaaagaagaggagaagggtgtttatttgaactttttg
aatttcctgataaacgatagcatatatcttcaggatgaaggattcaataaaattcgggaa
cttaaagaaaaggaaaaggaggggaaagtccatccttgggaggaaaatgaagtcagggag
tacataaggttagcgttggaagatatcaacatgctagcattcacttctgagcagattact
gcgccctttcttcttcctcagatagttgacagaatagctaatatgctgaattacttcttg
gtgcaactagtaggccctaaacggatctctcttgagagtgctgaaaaatatgggttcaaa
ccgaggatattactgaagaaaattattagcatttacgttcatatagcgagggatgataag
gaaaatacttttgctgctgcaatttgtaaagatggtcgatcatataacgaaaagttattt
actgaggtagtaaatatacctggattaggtgaagagatgacagcattgggagagtttgtt
aaccttagtgcaaaggtaaaacttgcagctatagcggaaatggacgtggaagcatcccta
ggggagataccagacgagttcttagacccaatccagtgcacactaatgaaagatccagtg
actcttccttcttctaaagttacggtcgaccgtttggtcatcaaaaggcatcttcttagt
gactccaaagatccgttcaaccgttcatatcttacccaagatatgctcattcccgatgtt
caactgaaatctcaaatagatgagttcatcaagtcaagaacccagcctactccgtcaagt
tcaaacaacattactcaaagcacaggaatattttaa
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