Papaver somniferum (opium poppy): 113328231
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Entry
113328231 CDS
T05758
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113328231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113328231
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113328231
mRNA degradation factors
5'-3' decay
Lsm complex
113328231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
113328231
NCBI-ProteinID:
XP_026431118
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWPGSEDIFLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL
YCDLPLGLYVIRGENVVLIGELDLEREELPPQMTRVSPAEIKRAQKAERDATDLKGSMRK
RMEFLDMD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggcctggttctgaagatatattcctttctacttctcttgctagctatcttgac
aagaagcttcttgtcttgctgagagatggccgaaaactcatggggatactccgttctttt
gatcaattcgcaaatgcggtccttgaaggtgcatgtgaacgagtaattgttggagaccta
tactgtgaccttccattaggtctttatgtaatccgcggggaaaatgttgtcttaatagga
gaactggatttagagagggaggaacttcccccacagatgactcgtgtttcacccgcagag
ataaaaagggcgcaaaaggcagaaagggacgccacagatttgaaaggctccatgagaaaa
agaatggagtttctcgacatggactga
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