Papaver somniferum (opium poppy): 113329094
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Entry
113329094 CDS
T05758
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113329094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113329094
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113329094
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
113329094
NCBI-ProteinID:
XP_026431851
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MHAVDCLDKLRKWHEHPSVLLMSYPCFLSLMREQSKHEYWRYMGGVLRESPGLLILDEGH
NPRSSHSMLRRFLMEVKIELRILLSGTLFQNSFDEYFNTLSLARPRFISEVLRELDPLYG
VKNRKGYRRKDTKRCKEILARKFFVDKIGRRIHSKYDEDRKKGLNKLKQLTKGFVDVYEG
DGSDCLPGLQAYALLLKPTPAQDKAMLKLLEYDCGTRYSLEYELRITLVSIHPWLLTSLE
CLDKFFNDDERKELAGQRHDITRGSKVRFVVNLMQKCVHKKEKVLIFCHNIAPMRYLMEI
FKNMFNWAEGEEMLILHGDQLVFQRTRMIDKFEDPGGNAQVLLASIGCCGEGISLTAASR
VVLLDSEWNPSKIKQAVGRAFRQGQEKIVYVYQLLTSGTVEEKKHSKTAWKDWVSRMIFV
GNNAKNSSHAKAENIDDEVLREIVEEDESDLFHLIMKDEKLMDRKKNETTAVFHMKGTF
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcagtggattgtctagacaaattgcgtaaatggcatgaacatccaagtgtcctc
cttatgagttacccttgtttcctctctttgatgcgagaacagtcaaagcatgagtattgg
agatacatgggtggtgttttacgtgagagtccagggcttttaatcctggacgaagggcac
aaccctagaagctcacattcgatgttaaggagatttctgatggaggtgaaaatagaatta
agaattttgctttcaggaacattatttcagaatagttttgacgagtacttcaatactctt
agcttggcaaggccgaggtttattagtgaggtgctaagggaattggaccctctgtatgga
gttaaaaatcggaaaggatatcggaggaaggacacaaaaagatgcaaggagatcctagca
agaaagttctttgtggataagattggtaggagaatccattcgaaatacgatgaagatcga
aaaaaaggtctaaataagcttaagcagctaactaagggtttcgtagatgtttatgaaggt
gatggatctgattgccttccaggtttgcaagcttatgctctgttgttaaaaccaactccg
gctcaagacaaagctatgttgaagctcctggagtatgattgtggtacgagatattctctt
gagtatgagctaagaatcactcttgtatctatccatccttggttgttgacaagcttagag
tgtctggacaagttcttcaatgatgatgaaaggaaagagctcgcaggacaacgacatgac
attacacgaggttcaaaggtgagattcgtcgtgaaccttatgcagaagtgtgtgcacaag
aaagagaaagtgttgatcttttgccataacattgctccaatgagataccttatggaaata
ttcaagaatatgttcaattgggcagaaggggaggaaatgttaatactgcatggtgatcaa
ttagtattccagcgcacaaggatgattgataaatttgaagaccccggtgggaatgctcaa
gtgttgctagcttcgattggttgttgtggtgaaggcattagtttgactgctgcatcacgg
gttgttttgctggattcagagtggaacccgtccaaaataaaacaggctgtaggtcgggcg
tttaggcaaggtcaggagaagatagtttatgtgtaccagcttttgacatcagggactgtg
gaagaaaagaaacacagcaagactgcatggaaagattgggtgtcaaggatgatatttgtt
gggaataacgcgaaaaattcttctcatgccaaagcagaaaatatcgatgacgaagttttg
cgagagattgttgaagaagatgaatctgacttgttccatcttatcatgaaagatgaaaag
ctgatggaccgaaagaaaaatgaaactacagcagtgtttcatatgaaaggaactttctga
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