Papaver somniferum (opium poppy): 113329158
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Entry
113329158 CDS
T05758
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-2 isoform X1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113329158
Enzymes [BR:
psom01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
113329158
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
113329158
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
113329158
NCBI-ProteinID:
XP_026431911
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All DBs
Position
1:complement(55943051..55947520)
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AA seq
326 aa
AA seq
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MEEGPLCSLFSSLVLPLEAVMEPRWKGKNAETKALADPKSKIVERLQSSLCKSDAQGFLL
DSVVLLPVGHEQIEVIELLNRSFFGRPRPNSYEHKQWYELDFEEAFYLCSSLECLKIMDE
NKCLVVNNDLWKYMKSKSKAFPESYIAYSHLRNKDWVVKDGSKYGADFVAYRHHPSLVHS
EFAVILEFDKSHRLRVLSDVKCAVRICASVAKTLLVLRINTKDCDFVSPPELDLYKVEEM
IPEQHLHIRKRLISTQEIPTLPTKDISTVSVPASSISRIQPKKAPLSLSVAESFILSEVQ
FLGERDQDGRERRVQKLKLLLILCQK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggtcctctctgttctctctttagtagtttggtcttaccattggaagctgta
atggaaccaagatggaaggggaagaatgcagaaactaaagctcttgccgatcctaagtca
aaaatagtagaacggcttcaatcttctctatgtaaatcagacgcacaagggtttctctta
gattctgttgtgcttctcccagttggccatgaacagattgaagttattgaactactgaat
cgttcttttttcggaagacctagacctaattcatatgaacataaacaatggtatgagcta
gactttgaggaagctttttatttgtgctcttctcttgaatgccttaagattatggatgaa
aataagtgtctggtagttaataatgatctatggaaatacatgaagtcaaagagtaaagca
tttcctgagtcctacattgcatattctcatcttcgaaataaagactgggtagtaaaagat
gggtcaaagtacggtgcagattttgtggcttaccgccatcacccatctctggttcattct
gaatttgctgtcattcttgaattcgacaagagtcataggttacgggtattgtcagatgtt
aaatgtgcggttcgtatttgtgctagtgtagctaaaaccttattggttttgaggattaac
accaaagattgtgatttcgtatctcctccagaattggatctttacaaagttgaagagatg
attccagagcagcacctacacattagaaaaaggttgatttcaacacaagagatcccaaca
cttcctaccaaagacattagtactgtttcagtgcctgcctcttcaatctccaggatccaa
cctaaaaaagctcctctctctctgtctgtcgctgaatcttttatcctgagtgaagtgcaa
tttttgggagaacgggaccaagatggaagggaaagaagagtgcagaagctaaagctcttg
ctgatcctatgtcaaaaatag
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