Papaver somniferum (opium poppy): 113329459
Help
Entry
113329459 CDS
T05758
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Module
psom_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113329459
Enzymes [BR:
psom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113329459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
113329459
NCBI-ProteinID:
XP_026432117
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MVRLRKTTNYIPLPVFFIIVTVVALTVNAHYINNVEHFGAKADGKTDSSSAFLKAWAASC
SSMVPSTVYVPRKKYTIGETVFKGPCNNSDITFQIDGVLIAPDYKQMNFSAQNWLLFDRV
DGLSVIGGFLDGRGTSLYACKASNQQGCPDGPTTLAFYTSNNILVQNVISVNAKLFHIVV
HSCSNVLLQGIKIHAPDESLNTDGIHIQNSFNVKVLNAGIKTGDDCISIGPGTQNLWIQR
IACGPGHGISIGSLAHDLEEEGVQNVTVKTVVFTETQNGLRIKSWGRPSKGFVKGVVFKH
ITMNNVYNPILIDQNYCPLKEGCPDQHSGIQISQVTFVDIQGTSATQVAMKFDCSETSPC
KDIKLQDIKLTYQQEKQQQLQEPAESFCKNVFGVALGPVLPPSCL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtaagattaagaaaaactaccaactacattccgttacctgtattcttcatcatcgtt
acagtggtagctttaacagtgaatgcacattatattaacaatgttgaacattttggtgcg
aaagcagatggaaagactgattcaagttcagcttttttaaaagcatgggctgcatcttgt
agttcaatggtaccatcaactgtatatgtacctcgtaagaagtatactattggtgagact
gtttttaaaggaccttgtaacaactcggacatcacatttcaaattgatggggttcttatt
gctcctgattataagcagatgaatttttcggctcagaattggttactctttgatcgagtc
gatgggttgtctgtaattggtggattccttgatggtcgcggaactagtttatatgcttgt
aaggcttccaatcaacaaggatgccctgacggaccaaccacgcttgcattctatacttcc
aataacatcctggtgcaaaatgtaatctctgtgaacgcgaagttgttccacattgttgtt
cactcgtgttcaaatgtgttattacaagggatcaagattcatgcaccagacgaaagcctt
aacacagatgggatacacattcagaactcgtttaatgtaaaagttttgaatgccggtata
aagactggagacgattgcatatctattggccctggcactcaaaacttatggatccagcgt
attgcatgtggtcctggacatggtataagcattgggagtttggctcatgaccttgaagaa
gaaggcgtgcaaaacgtgactgtaaagactgtggtattcactgagactcaaaacggattg
agaatcaaatcttggggaaggcctagtaaagggttcgttaaaggagtagtatttaaacac
attacgatgaataatgtttataatccgatacttatcgatcaaaattactgtccgcttaaa
gaaggatgcccagaccagcattccgggatacaaatcagtcaggtaacattcgttgacata
caagggacatcggcaacacaagttgcaatgaaatttgactgcagtgaaacttccccatgt
aaagacattaagcttcaggatattaaactcacttatcaacaagaaaaacagcaacagttg
caggaaccggcagaatccttttgtaagaatgtttttggagttgctcttggtccagtactc
cctccaagttgtttatag
DBGET
integrated database retrieval system