Papaver somniferum (opium poppy): 113329825
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Entry
113329825 CDS
T05758
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Module
psom_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113329825
Enzymes [BR:
psom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113329825
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
113329825
NCBI-ProteinID:
XP_026432436
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDRLFIILYSLTLIILLFLITFLPSTNAGTYNVAAFGAKTDGTDSTKPFLQAWSLACSSE
KPATMWIPRGTYLLKKTAFSGPCRSKRVTVQVDGRIQAPTDFWFIGNSGSWILFQGIDGL
TINGGILDARGSHLWNCRRYGANCPQGATSLSLSSVKNGIVNGLISVDSQRAHMSVNGCN
NLRVRRVTLIAPDQSPNTDGIDIQSSTAVTIVDSSIRTGDDCIAIGPGTKNLMVQRVGCG
PGHGISIGSLARNPNEAGVEGITVKDVTFTGSDNGLRIKTWPKPSNSFVKNVLYQNIVMN
NVRNPIIIDQIYCPGTKGCSKQNSGVKISGVTYQNIRGTSATPIAVRFHCSATTPCSGIK
LSNVKLTYSKQPAKSFCSSATGTSQGQVAPQSCFY
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggataggttattcatcatcttatattctcttacactaatcatacttctcttcctcatc
acgtttctgccatcaactaatgcaggtacatataatgttgcagcatttggagcaaaaaca
gatggaacagattcaacaaaaccctttctacaagcatggtctttagcatgtagttctgag
aaaccggcgaccatgtggatacctcgaggaacttatttactcaagaaaacagcttttagt
ggtccttgtagaagtaaaagagttacagttcaagttgatgggaggattcaggcgcctacg
gatttttggtttatcgggaattctgggagttggattttgttccagggtattgacggttta
accatcaacggtgggatattagatgcacgaggatctcatttgtggaattgtaggagatat
ggtgcaaattgcccccaaggtgctacgtcgttgtcactaagcagtgttaaaaatggcata
gtcaacggtttgatatcagttgatagccaacgtgctcatatgtctgtcaatggttgcaat
aatttgagggttagacgtgtgacgcttattgcacctgatcaaagccctaacacagacggc
atagatatacaatcatcaactgctgttacaattgtggattcaagcatcagaacaggagat
gattgtattgcgattggtccagggaccaaaaatctaatggtgcaacgcgtcggatgtgga
cctggacatggcattagtattggaagtttggccaggaatccgaatgaagcaggggtggaa
ggcattacagtaaaggatgtaaccttcactggatcagataatggattacggatcaaaaca
tggccgaaaccaagtaacagtttcgtaaagaacgttctttatcaaaacatcgttatgaat
aatgttcgaaatcctatcattattgatcaaatatattgccccggtaccaaaggctgctct
aaacaaaattctggggttaagattagcggagtgacataccaaaatatacgtggaacatcc
gcaacaccaattgccgttagattccattgcagtgccactactccgtgcagtggaatcaaa
ttatcaaatgttaaacttacttattcaaagcaacctgcaaagtccttttgttctagtgcc
actggaacatcacaaggacaagtcgctccacaaagctgtttctactaa
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