Papaver somniferum (opium poppy): 113330037
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Entry
113330037 CDS
T05758
Name
(RefSeq) elongation factor 1-alpha-like isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113330037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113330037
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113330037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Zn_ribbon_RanBP
GTP_EFTU_D4
Vps36-NZF-N
CD1107-like
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
113330037
NCBI-ProteinID:
XP_026432672
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MPRKAGYDLGYDDYGDYDDYGYDEDADEAYGDNPDVDGYVEEETPKVFQTASKPGTWSCP
ICTFANDEDLSACDICGVLRDPVVSNNGNNKKSADVSKGYGASILAQALLAPLPRRTHEM
DVIIQRLNASFKIDSVLQEDLVKFGKHSAMKFPQGNTMELSSSGISEKKEKVNQLPSKNK
LKAPSASVPEVGQPSSYGRNGSSLDDDNLQTLNNSFNKVKMSAGSGSSQNRVSTQKAKSV
SPYKPEKWMLPEQDGKLTQLNLAIVGHVDSGKSTLSGRLLNLLGRISQKEMHKYEKEAKQ
QGKGSFAFAWAMDESAEERERGITMTVGVAYFDSKKYHVVVLDSPGHKDFVPNMISGATQ
ADAAILVIDASMGAFEAGIDANGGQTREHAQLIRSFGVDQVIVAVNKMDVVGYAKERFDS
IKSQLGLFLRSCGFKDSFLSWIPLSAMENQNLVTAASDARLSSWYEGPYLLDAVDSLQPP
VRDVSKPLRMPICDFIKSQSLGQLAVSGKLESGALRNGSKVMVLPYGDVATVRTIERDSK
PCSVARSGDNVAVSLQGIDANRVMAGGVLCHPDFPVAIASCFELKVLVLDVVMPILIGSQ
IEFHVHHAKEAARVKKIVSLLDQKTGKVSKKAPRCLTSKQSALIEVNLDAAVCVEEFSEC
RALGRVFLRSSGRTIAVGIITRIIE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagcgggctacgacttgggatacgatgactatggtgactatgatgattat
ggctatgatgaggatgcagatgaagcatatggtgataatccagatgtagatggatatgtg
gaagaagaaacccctaaagttttccagactgcctctaagcctgggacttggagctgtccg
atttgcacatttgcaaatgatgaagacttatctgcttgtgatatctgcggagttcttcgg
gaccctgttgtcagcaacaatggcaataataaaaaatcagctgatgtgtccaaaggttat
ggagcatccatactggcccaagctcttcttgcacctttgcctcgtaggacgcacgaaatg
gatgttatcattcagaggctaaatgcctctttcaagattgatagtgtccttcaggaggat
ttggttaaatttggaaaacattctgccatgaagttcccacaagggaacactatggaattg
tcttcttcaggcatcagtgagaaaaaagaaaaggttaatcaacttccaagcaagaataag
ttaaaggctccctctgctagtgtgcctgaagttggacaaccaagttcatatgggagaaat
ggatcctcacttgatgacgacaatctacaaacactaaacaacagtttcaacaaagtaaag
atgagtgctggttctggttcttcccagaatcgtgtaagtacgcagaaggctaaatcagtc
tcaccatacaagccagagaaatggatgcttccagaacaagatggaaaactgactcaattg
aatcttgctattgtgggtcatgttgattcgggaaaatcaacactgtcgggcagacttcta
aatcttttagggcgaatttcccagaaagaaatgcacaaatatgaaaaagaggctaagcaa
cagggaaaggggtcctttgcttttgcatgggcaatggatgagagtgccgaagagagggaa
aggggtattacaatgacagttggtgtggcttattttgactccaagaagtatcatgttgtt
gtgctagattctcctggtcataaagattttgtcccaaatatgatatctggcgctacgcaa
gcagatgctgccattcttgttattgatgcttcaatgggtgcatttgaagctggtatagat
gctaatggggggcaaacaagagagcatgcacagctcataagaagttttggggtcgatcaa
gttattgtcgctgtaaataaaatggatgtggttgggtacgcaaaggaaagatttgattca
ataaaatcgcaacttggtctctttcttcgatcttgtggtttcaaggactcttttttatca
tggatccccttgagtgctatggaaaatcagaatttggtcacagctgcttctgatgcccgt
ttatcatcttggtatgagggcccatatctcttggatgctgtagattcattgcaaccacct
gttagagatgtctctaagcctttacggatgcctatctgtgacttcattaagtcacaatca
ttagggcaactggcagttagtgggaaattggaatctggagctcttcgaaatggttcaaag
gtcatggtgctgccttatggagacgtagcaacagttcgtaccatagaacgtgactctaaa
ccttgcagtgtcgccaggtctggtgataatgtggctgttagtctacaaggcattgatgca
aatcgtgtgatggctggtggtgtactctgtcacccagattttcccgtggctattgcatcc
tgtttcgaattgaaggtccttgttttggatgttgtaatgcctattctaatcggttcacag
attgaatttcatgtacatcatgccaaagaggcggccagagttaaaaagatagtgtctttg
ttggatcagaaaactgggaaagtctcaaaaaaggcaccccgctgtctgacatccaaacaa
agtgcattgatagaggtgaacctagatgcagctgtatgtgtagaagagttttccgagtgt
cgagctttggggagggttttcttgcgatcatcgggtagaactattgctgttgggatcata
acccggataattgagtaa
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