Papaver somniferum (opium poppy): 113330323
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Entry
113330323 CDS
T05758
Name
(RefSeq) rhamnogalacturonate lyase B-like isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113330323
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113330323
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
113330323
NCBI-ProteinID:
XP_026432924
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All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MNHCTFKAKEKIHAVCWNITIPSSSSSSSSPSSPTMTRRNQQTFISWRFLFLFVISLLLT
TFPVSHQITIDVDESTFEGSPSVTTSEDKIDEKRVVFEGCGGVASSSHIPVQLIIQHGYV
IIDNGIVQITLSKPEGHVTGISYNGIDNVLETRNNPDNRGYWDLNFDVPRHDSYKKKKES
KHEDYDRIKGTEFRVITEDENQVELSFLRSWDPSMQGKYYPMNIDKRFGMLRGCSGFYSY
GIYERLEGWPVSNLTETRIAFKLSNDKFNYMAVSDARQRLMPTVQDRSSGHQLAYPEAVL
LTNPTNPLFKGEVDDKYQYSCENKDNRVHGWISSDHSVGFWVITPSDEFRTGGPLKQDLT
SHVGPTALAMFVSSHYAGEALELRFEEGEPWKKVFGPVLIYLNSAVSLDGKLNNPYQELW
EDAKHQMIVEVENWPYNFPASEDYLKSDQRGAVSGKLVVHNRYSNKEYFYASSAYVGLAP
LGNAGSWQNETKGYQFWTNADANGTFSIRNVRKGDYNLFAWVPGFIGDYRYNVNLTILPG
SDINLGVLIFDPPRDGPTIWEIGFPDRSAAEFFIPNPDPRYINRLYVDHRTDREGKILSS
VDKFRQYGLWKRYAEMYPHEDLVYTIGLNDYSKDWFYAQVPRRIGAKEFKKTTWKIKFDL
VNVDQTGTYTLWVALASATYAELQVRINNENDHVPHFTTHMIGRDNAVARHGIHGLYSLF
HVNVSSSRLVQGQNTIFLTQARNNSAFRAIMYDYIRLEGPSMLYI
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaaccattgtaccttcaaagccaaagagaaaattcatgcagtgtgctggaatattact
ataccatcatcatcatcatcatcatcatcaccatcatcaccaaccatgacaagaagaaat
cagcagaccttcatttcatggcggtttttgtttcttttcgttatctcccttctgctaact
acgtttcctgtaagtcatcaaataacgatcgacgtcgacgaatcaacattcgaaggaagt
ccttcagtgactacatcagaagataaaattgatgagaagagggtagtttttgaaggttgt
ggtggcgtagcatcgtcttcccatattcctgtacaactaattatacaacacggctatgtt
attatagataatgggatagttcaaatcacattgtcaaagccagaagggcatgtaactgga
ataagctacaatggaatcgataatgtacttgaaactagaaataatcctgataacagaggc
tactgggatcttaatttcgatgtacctagacatgattcttataaaaaaaaaaaagaatct
aaacatgaagactatgacaggataaaaggcacagagttcagagtgataacagaagatgaa
aaccaggtagagctgtcattccttagatcatgggacccaagtatgcaggggaaatactac
ccaatgaacattgacaaaaggtttggaatgttgcgaggttgttcgggcttttactcgtac
ggcatttatgaaagattagagggttggcctgtttctaaccttaccgaaacaaggattgca
ttcaagcttagtaatgacaagtttaactacatggccgtatcagatgctaggcaaagacta
atgccaacagtacaagaccggtcatcgggtcatcagctagcttaccctgaagctgttctc
ttaacaaatccaacgaatcctttgtttaaaggagaagtggatgataagtaccagtattct
tgcgaaaacaaagacaacagggtccatggttggataagctctgatcatagcgttggattc
tgggttatcacacctagtgatgaattccgtactggtggccctctgaagcaggatctaaca
tctcacgttgggcctacagcactcgctatgtttgtgagtagtcactatgctggagaagct
ttagagctgagatttgaagaaggggagccatggaagaaagtttttggtccggtactaata
taccttaactcggctgtttcccttgatggcaagctcaataatccttaccaagaactctgg
gaagatgcaaaacaccagatgatagtggaagttgaaaattggccatacaatttcccagct
tcagaggactaccttaagtcagatcaacgcggggcagtaagtggtaaattagtggttcat
aataggtacagcaataaagagtatttttacgcaagctctgcctatgtaggcttagcaccc
ttgggaaatgccggttcatggcaaaatgaaaccaagggttaccagttttggacaaatgca
gatgcaaatggaacattttctataagaaatgtgcgcaaaggagattataatctttttgca
tgggttccaggttttatcggtgattacagatataatgtcaatcttaccatccttccagga
agtgatatcaatttgggtgttcttatttttgatcccccaagagatggacctacaatttgg
gagattggcttccctgaccgttccgccgcagagttctttatacctaaccctgatccaaga
tatatcaacagattatatgtagatcaccggactgacagagaagggaaaatattgagttca
gtggataagtttaggcaatacggactgtggaagaggtatgcggagatgtatccacatgaa
gatcttgtctacaccatcggcttaaatgactactcgaaagactggttctacgcacaagtc
ccaagaaggataggagccaaagaatttaaaaaaacaacatggaagataaaatttgacctt
gtaaatgtggaccagaccgggacatatacgttatgggtggctcttgcatctgcaacttat
gcagaattacaggttcgtatcaacaatgaaaatgaccacgtcccgcacttcacaactcac
atgatcgggagggataacgctgtagctaggcatggaattcatggattgtactcgttattt
cacgtaaacgtatcaagttctcgattagtgcaaggacaaaataccatatttttgactcaa
gcaagaaataacagtgcttttcgagcaattatgtacgattacattcggttagaaggacct
tcaatgttgtacatttga
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