Papaver somniferum (opium poppy): 113331070
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Entry
113331070 CDS
T05758
Name
(RefSeq) exosome complex component CSL4-like isoform X1
KO
K07573
exosome complex component CSL4
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113331070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113331070
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113331070
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113331070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
113331070
NCBI-ProteinID:
XP_026433638
LinkDB
All DBs
Position
Unknown
AA seq
202 aa
AA seq
DB search
MVMEVEKEKEEVMVTPGEVLGYSSTLIPGKGAYLHNKTIHASLTGRRVIIPPSDSPHQKR
SIVEVTGHKGHGAVPEPGSIVIARVTKVMAKMASADIMCVGTKSVKEKFSGVIRKYVDRQ
QDVRATEIDKVDMHLSFRNGDIVKAFVLSLGDARAYYLSTAKNELGVVSAESIGGATMVP
ISYTEMQCPLTGQIEQRKVAKV
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggaagtagaaaaagagaaggaagaagtaatggtaacaccaggagaagtgttg
ggttattcatcaaccctaatcccaggtaaaggtgcatacttacacaataaaactatacac
gcttctcttactggacgtcgggtcatcatccctccatccgattcacctcaccagaagaga
tcaattgtggaggttactggtcataaaggtcatggtgccgttcctgaacctggatccatc
gtcattgctagggtaactaaggtgatggctaagatggcttcagctgatattatgtgtgtt
ggtaccaaatcggtgaaagaaaagtttagcggggttatcagaaagtatgttgacaggcaa
caagatgttcgagccacagaaattgataaagtggatatgcacttgtcttttcgcaatggt
gatatagtgaaggcttttgttctctctcttggagatgcacgagcttactatctttctact
gcgaagaatgaactgggtgttgtatctgctgaaagcatcggaggagcaacaatggttcca
atcagttatacagagatgcagtgtcctttgacaggccagattgaacaaagaaaagttgcc
aaggtatga
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integrated database retrieval system
