Papaver somniferum (opium poppy): 113331487
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Entry
113331487 CDS
T05758
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113331487
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113331487
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113331487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
RNA_pol_3_Rpc31
AAA_22
bHLH_IRO3
nSTAND3
Mpt_N
Motif
Other DBs
NCBI-GeneID:
113331487
NCBI-ProteinID:
XP_026433979
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MEILSPLCSTPPLCISISSKPIFNFFPIPSYQNLGFARTRVLTLKISSTKLYSFRKRSNF
SIEGQVSDVEEEEEDEEEEEDEDDDDVAAEEYEEFIVDEDTNEDDDEEESDSLIVSSSSS
SRYEEHKWQRVERLCNDVKELGEGIIDYNELSSIYDFRVDKFQRLAIQAFLRGSSVVVSA
PTSSGKTLIAEAAAVATIARGRRILYTTPLKALSNQKFRDFRDMFGESNVGLLTGDSAVN
KEAPILIMTTEILRNMLYQSVGTDSSGSGLFHVDAIVLDEVHYLSDIYRGTVWEEIVIYS
PKEVQLICLSATVANADELAGWIEQIHGKTELVTSTKRPVPLTWHFSTKKSLSPLLNDKG
TAMNRKLSLNYLQLSAAGVKPFKEDGYRSRNSRRRESDRRYNSASDISGQSALSKNDINN
IRRSQVPQVRDTLWHLRARDMLPAVWFIFSRKGCDVAVQYAEDCKLLDECEMAEVDLALK
KFRIQYPDAIRESSVKGLRQGVAAHHAGCLPLWKSFIEELFQRGLIKVIFATETLAAGIN
MPARTAVISSLSKRCETGRIQLSPNELLQMAGRAGRRGIDEKGHVVLLQGTNEGAEEGCK
VLFSGLEPLVSQFTASYGMVLNLLAGARVTRRSKETDETKVFRAGRTLDEARKIIEQSFG
NYVGSNVMIAAQEELAKIEKEIDFLTLEVTDAAIDEKSRKQMSAKAYKEIHALQEELRAE
KRLRTKLRREMEIQRMAALKPILKELEDGQLPFLCLQHKDSEGFMHLVPAVYLGEVISLS
SSKVKHMIDADDSFELNTVDNELEVGDSDRQLDAQLSYYVALGSDNSWYLFTQKSIKTVY
RTGLPNAPLAEGDASPREIMQSLLDKEEIDWEKLSESEFGGLWRKEGSLETWSWSLNVPV
LSSLSEDDEVLERSQVFHDALERYKKQRTMVSRLKKKISRSEGFKEYKKIIDVTNFTKEK
IERLRARSIRLTNRIEQIEPSGWKEFLQISNVIHEARALDKNTHVIFPLGETAAAIRGEN
ELWLAMVLRNKILLDLKPAQLAAVCGSLVSEGIKLRPWKNNSYVYEPSATVLNMIKLLDE
QRSSVLQLQEKHGVKISCALDSQFAGIIEAWASGLTWREIMMDCAMDDGDLARLLRRTID
LLVQIPKLPDIDPVLQKNALAASNVMDRPPISELAG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggagattctttctccactttgttcaacccctcctctttgtatatccatatcttcaaaa
cccatcttcaatttcttcccaatcccatcttatcaaaacctagggtttgccagaacaaga
gtcctgacattgaagataagttcgacaaaattgtatagttttagaaaaaggtctaatttt
tcaatagaggggcaagtatctgatgttgaagaagaagaagaggatgaggaggaggaggaa
gatgaagatgatgatgatgtagctgcagaggaatatgaagaattcattgttgatgaagat
acgaatgaagacgacgacgaagaagaaagtgattcattaattgtatcttcttcgtcttca
tctagatatgaagaacataaatggcaaagagtagaaagactttgtaacgatgttaaagaa
ttaggtgaagggattattgattacaatgaactctcttctatttacgactttcgtgtcgat
aaatttcagagattggctatacaagcattcttaagaggttcatcagttgtagtttctgct
ccaactagtagtggaaagacattgatagctgaagccgcggctgtagctacgattgcaagg
ggaaggcgaatattgtatacaaccccattgaaggcattgtctaatcagaagtttagagat
tttcgtgatatgtttggtgaaagtaatgttggtctacttactggagattctgcagttaac
aaagaagcacccatattgattatgacaacagaaattctaaggaatatgttgtatcagagt
gttggaaccgattcttctggtagtggattatttcacgtcgatgcaattgttttggatgag
gttcattatcttagtgacatctacaggggtacagtttgggaagaaatagtgatttattct
cctaaagaagttcagcttatatgtctttcagccacagttgccaatgctgatgagctggct
ggttggattgagcagattcatggtaaaacagagctggtaacatccactaaacgaccagtt
ccattgacttggcatttctctacaaaaaaatctctgtcacctcttcttaatgacaaagga
actgccatgaacaggaaattatcactcaattatctacaactttctgctgcgggagttaaa
cctttcaaggaagatggatatagaagcaggaactcaagaaggcgagaaagtgaccgccgc
tataatagtgcttcggatatatctggacagtcggcactctctaaaaatgacataaacaac
attcgccggtcacaggttccacaggttagagacacattatggcaccttcgggcaagggat
atgctgccagctgtttggtttatttttagtaggaaagggtgtgatgtagcggttcagtat
gctgaagactgcaagcttttagatgagtgtgagatggctgaagttgatctagcattgaag
aagtttcgcattcaatatcctgatgccatcagagagtcttctgtgaaaggtctgaggcaa
ggggttgcagcacatcatgctggttgcttacccctgtggaagtcatttattgaagagttg
tttcagagaggactgattaaggttatttttgcgacggaaacacttgctgctgggatcaat
atgccagctagaacagctgttatttcttctcttagcaaaagatgtgaaactggacgtatc
cagttaagtccaaatgaacttcttcagatggctggtcgagctggccgtagaggtatcgat
gaaaagggtcatgttgtccttcttcaaggtaccaatgaaggagctgaagaaggctgcaag
gttctcttttctggactagagcctcttgtgtcgcagtttactgcttcgtatggaatggtg
ctaaacctcctcgctggtgcaagagtaactcgtagatcgaaggagacagatgaaacaaaa
gtctttcgagcagggcgaacattggatgaagctaggaagatcattgaacaaagtttcggg
aattatgttggaagcaatgtcatgattgctgcccaagaagagctcgccaaaatagaaaaa
gagatcgacttcctaactcttgaagttactgatgctgctattgatgaaaaaagccgaaaa
cagatgtctgcgaaggcatataaggagatacatgcattgcaggaagaattacgggcagaa
aaacgacttcggacgaagctgcgacgagagatggaaatacaaagaatggccgctctgaag
cctatattgaaggagttggaagatgggcagttaccttttctatgcttgcaacacaaggat
agtgaagggtttatgcatttagtccctgctgtttatttgggcgaggttatttcactctct
agctctaaagtcaagcacatgattgatgcagatgactcttttgaactaaacactgtggat
aatgagttggaggttggagatagtgacagacaacttgatgcccagttgtcctattacgtg
gctcttggttcggataattcctggtatctcttcacacagaagtcgattaagacagtttat
agaacgggcttgcccaatgctcctctagctgagggtgatgcttcgcctcgagaaattatg
cagtcgctacttgataaggaagaaattgactgggaaaagctgtctgagtctgaatttgga
ggtctttggcgtaaggaaggatctcttgaaacatggtcttggagtttgaatgtgccagtc
ttgagtagcctttcagaagatgatgaggtgctagaaaggtcacaagtgttccatgatgct
cttgaacgttacaaaaagcaaagaactatggtgtctcgtttgaagaaaaaaatctcgcgt
agtgaaggcttcaaagaatataagaagatcattgacgtgaccaactttaccaaggaaaag
attgaacgactaagggctcgatcaattcgcttaactaatagaatagagcaaattgaacca
tctgggtggaaggagtttttgcagatcagcaatgtcatacatgaagcaagagctttggat
aaaaatacacacgtgatatttccacttggtgaaacagcggcagccattcgaggagaaaat
gaactctggcttgctatggtgctccggaacaaaatattattagatttaaagccagctcaa
ttagctgctgtctgtggaagtctagtttccgaaggaattaagcttcgtccatggaaaaat
aatagctacgtatatgagccgtccgctactgtattaaacatgatcaagcttctggatgag
caaagaagctcggttcttcagctccaagaaaaacatggtgtaaagatttcttgtgcattg
gatagtcaatttgctggaatcatcgaagcttgggcctctggcttaacttggcgagaaatt
atgatggattgtgcaatggatgacggggatttagctcgtctattaagacggacaatcgat
ttattggttcagattcctaagttgcctgatattgacccagttctgcaaaaaaatgcgttg
gccgcatctaatgtcatggaccgacctccaataagcgagcttgctggttag
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