Papaver somniferum (opium poppy): 113332131
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Entry
113332131 CDS
T05758
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113332131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113332131
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
RNases
113332131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
113332131
NCBI-ProteinID:
XP_026434592
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MDKKLAAAEKRVLVHMVKMMQKKGKRGTKGYWKEFLNVHDLKMGDTIRDPSRRSIDDLVS
FLTTFTEEEDIKFLEKALERGSNREAVIQLQKNASDIESSPQKLVVLTLEHPEYACNYTF
PSDEEDWVITKMGKLSKAKESDKMVAMDCEMVLCEDGTEAVVQVCVVDQNLEVKLDTLVK
PNKPIVDYRSEITGITAKDLEGVTCSLADVQKSMKKLLSHGTILIGHSLNCDLRALKLDH
ARVIDTSLIFRCTDGTTRKKPSLCHLSKIVLGHDLREKGAPHNCLADARAAMKLVLAKLE
KGFDEIISLDAKEVTGDDLLKLFVHRIPIRVTADELRKIFPEDSTVVLEPFYKPQAKQYY
ASAIFKDQQEALATFESIEGEEGKDSHGLPQKFVTFQLRNGKFVSVYVRKMVRDDHPLLD
SSRKRRIQEVEDDDEQSNKKPKTNLDKCAEHIKEIKSLTEQLEQKNSQVVNLQKIIAALI
RKEGL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaagttagctgctgcggagaagcgggttctcgttcatatggtaaaaatgatg
caaaagaaaggaaaaagaggcaccaaaggatattggaaggaatttttgaacgttcatgac
ctcaaaatgggtgacactataagggacccttcaaggaggtctattgatgacttagtttct
tttctgacaacatttacagaagaggaagatataaagtttttggagaaagcattggaacgt
ggatctaatcgcgaagcagtgatacagttgcagaagaatgcttcagatattgaatcctct
ccccagaagctggttgtcttaactcttgaacacccagaatacgcatgcaattacaccttc
ccatccgatgaggaggactgggtaatcacaaaaatgggtaaactttctaaggcaaaggaa
tccgataaaatggttgctatggattgtgagatggttctttgtgaagatggtacagaggct
gtagtgcaagtgtgtgttgtagatcagaatttagaggttaaactcgatacacttgtgaag
cccaataagcctattgttgactatagatctgaaataactggaatcactgctaaggatttg
gaaggagttacttgttctttagcagatgtacagaaatcaatgaaaaagctgttgtcgcat
ggaactattttgatcggtcacagtttgaattgtgatctacgagctctgaaattggatcat
gcaagggttatcgacacatcgcttatcttccgatgtacagatggaactactcgcaagaaa
ccttcattgtgccaccttagcaagattgtgctcggccatgacctcagggagaagggtgct
ccacataattgtctagccgatgcacgtgctgcaatgaaactggttcttgccaagctggaa
aaaggatttgatgaaatcatttccttggatgccaaagaggtaaccggtgatgatctattg
aagctttttgttcacagaataccaattcgtgtaactgcagatgaattacgtaaaatattt
ccagaggactctactgtcgtacttgagcctttctacaaaccccaagcaaaacaatattat
gcgtctgccattttcaaagatcaacaggaggcacttgccacttttgaaagtattgaaggt
gaagaaggaaaggattcacatggtttgcctcagaagttcgttacctttcaactcagaaat
ggaaaatttgtcagtgtttatgttcgtaaaatggttagagatgaccatcctttactagat
tcttcaagaaagagacgtatccaagaagtagaagacgacgatgagcagtctaacaaaaag
ccgaaaacaaatttagacaaatgtgcggaacacatcaaagagattaaaagtcttacagaa
caactcgagcaaaagaatagtcaggtggttaacttgcaaaaaatcatagctgctctaata
aggaaagagggactctaa
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