Papaver somniferum (opium poppy): 113333695
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Entry
113333695 CDS
T05758
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113333695
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113333695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113333695
04121 Ubiquitin system [BR:
psom04121
]
113333695
03400 DNA repair and recombination proteins [BR:
psom03400
]
113333695
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113333695
Spliceosome [BR:
psom03041
]
Complex B
Other components
Prp19 complex
113333695
Complex C
Prp19-CDC5 complex
113333695
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
U-box type E3
113333695
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
113333695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Prp19
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
zf-Nse
Beta-prop_DCAF4
PEP5_VPS11_N
WD40_like
U-box
PUMA_CC
V_ATPase_I_N
Motif
Other DBs
NCBI-GeneID:
113333695
NCBI-ProteinID:
XP_026435911
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MICAISGEVPEEPVVSKKTGHLFEKRLVERHVEDFGKCPVTGEPLTMDDLMPVKTNKAVK
PRPLQAASIPGLLGMFQIEWDQLMLSHFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARTLLTLAERHVPLPASTTANDSTFNNGKRAADDVNMDHDGKRSLPGISADIIADL
TDCNTLLSQQRKKRQIPSTLAPVDALERYTQLSSHPLHKTNRPGILSVDIHPSKDIIATG
GVDTNAIVFDRTSGQILSTLSGHSKKVTSVKFVPKDDFFVTASADKTVRVWQGSEDGNYN
CRHVLKDHTAEVQAVTVHATNNYVVSASLDSTWCFYDLTSGSCLTQVGDTSDGDGYTSAA
FHPDGLILGTGTSQANVRIWDVKSQSNVAKFEGHSGPVSAISFSENGYFLATAADDGVKL
WDLRKLRNFRTFAPYDSNTSTNSVDFDHSGSYLAIAGSDIRVYQVANVKSEWNCVKTFPD
LSGTGKATSVKFGPNAQYLTVGSMDRNLRIFGLPGDSAEE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgatctgcgcaatatctggtgaagttccggaagaacctgttgtttcaaaaaaaactggt
catctttttgagaaacgattggttgagcgtcatgtagaggattttgggaaatgcccagtg
actggggagccacttacaatggatgatcttatgcctgtgaaaacaaataaggcagttaaa
ccgagaccattacaggctgcaagcatccctggattacttggaatgttccaaattgagtgg
gatcagttgatgctgtcacattttgcgttggaacaacagttgcatacagcaaggcaagag
ctaagtcacgctctctaccagcatgatgctgcttgccgtgttatagcaaggctgaaaaag
gaaagggatgaagcaaggactttgctgactctggcagaaagacatgttccattgccagca
tcaacaactgcaaatgattccacatttaacaacgggaaaagagctgccgatgatgtgaat
atggaccatgatgggaagagatcactccctgggatttcagctgatattattgccgatctt
accgactgtaatactttactgtcacagcagcggaaaaaacgccagattccttccacattg
gctcctgtcgatgcccttgagaggtacacccagctttctagccatccccttcacaaaact
aatagacctggcattttgtccgttgacatacatccatccaaggatatcattgcaaccgga
ggggttgacacaaatgctattgttttcgaccgcacatcagggcagattttgtctacactc
agtggccattcgaagaaggttaccagtgtcaaatttgtacccaaggacgatttctttgtt
actgcttcggcagataagactgttcgtgtgtggcaaggatctgaagatggaaattataac
tgtcgacacgtcttaaaagatcatactgccgaggtgcaagctgtgactgttcatgccacc
aataactacgtcgtctctgcttcacttgatagtacatggtgcttttatgaccttacttct
ggatcatgcctcactcaggtcggagatacttcagatggagatggctatacatcagctgcg
tttcatcctgatggtcttatcctaggaactggaacgtcacaggctaatgttagaatttgg
gatgtgaaaagtcagtcgaatgttgcgaaatttgaagggcatagtggaccagtttctgcc
atatctttctctgaaaatggctacttcctggcgactgctgctgatgatggggttaaattg
tgggatcttcgaaagttgaggaatttcaggacctttgcgccctatgattcaaatacgtca
actaattctgtggatttcgatcacagtggaagttatcttgccattgctggctctgatata
agagtgtaccaagttgcaaatgtgaagtcagaatggaactgtgtcaaaacttttcctgat
ttatccggcacagggaaagcaacatctgtgaagtttggtccaaatgctcagtatttgaca
gttgggtcaatggaccgaaacctccgcatatttgggctgccaggagattctgcagaagag
tag
DBGET
integrated database retrieval system
