Papaver somniferum (opium poppy): 113333939
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Entry
113333939 CDS
T05758
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
psom04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113333939
04120 Ubiquitin mediated proteolysis
113333939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113333939
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113333939
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
U-box type E3
113333939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
113333939
NCBI-ProteinID:
XP_026436085
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MATKKPKRSTEEVEDIIIRKIFLVTLVDSMDKDSRVIYLELTAAEILSEGRPLLLNHDLM
ERVLIDRLSGQFPGAEPPFVYLVGCYGRAGEEGKKITGMKDKSLFSAMDAVVKQAKRLTV
SYCRIHLGNPDMFTSNGESNATKSSVYPLLGLLYSQFSSSVDAFGGSSSSTDGGLSCPPG
FLEEFFRDTDMDSMESIFKEMYESLRGSVLKVSALGNFQQPLRALRMLVNFPHGAKALVS
HPWWLPTGTYVNGRVIEMTSILGPFFHVSALPDHTIFKSEPDVGQQCFSNSRRPADLQSS
FSTIKTVMNNLYDGVAEVFLYLLKNSDTRECVLSYLAEVIKKNATRAHMQVDPVTSASSG
SFVNLSAVMLRLCEPFLDASLTKRDKIKATYVFDNTRLDFRGLTALHASSEDVTSWLDNL
KMDGSDRTSDEDNRMLKSQEATSSGSSVGLPASLSKARPMTMCGGKTQYNFVCECFFMTA
RVLNLGLLKAFSDYKHLAQALSRSEDTLSNLKGMPPTPQLQADIDRLEKEVEFLSQEKLC
YEAQILRDGSFIQRTLSFYRLMVVWLVDLVGGFKMPLPSCCPMELACMPEHFVEDAMELL
IFASRIPRAMDGFMLDDFMNFIIMFMGSPNYIKNPYLRAKMVEVLICWMPERSGSSSTAS
LFEGHQFAVEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWI
KIAKEEEKGVYLNFLNFLVNDSIFLLDESLNRILELKEIEKEMANTVEWERRSAQERQER
TRQFRSQENIIRIDMRLAMEDVGMLAFTSEQITVPFLLPEMVERVASMLNYFLLQLAGPQ
RKSLTLKDPEKYEFRPKILLKRIVEIYVNLAKGDRENIFPFAISKDGRSYNEQLFTAAAA
ILHRIGEDSRMVQEFLELGNKAKLAASEAMDAEATLGEIPDEFLDPIQYTLMKDPVILPS
SRITVDRPVIQRHLLSDNSDPFNRSHLTQDMLIPDVELKARIEEFIRSQGLKKHSSEGLN
KEAMQTETGEMIMIE
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaaaaaacctaaacgatcgactgaagaagttgaggatataattattcggaaa
atatttttggtcacgctagttgattcaatggataaagatagtagagttatttacttggaa
ttaacagctgctgagattttaagtgaagggagaccattattgttgaatcatgatttgatg
gaacgagtgcttattgatagattatcaggtcagtttcccggtgctgaaccgccttttgtt
tacttagttggttgttatggtcgtgcgggtgaagaaggtaagaagattactggtatgaaa
gataaaagtttgttttctgcgatggatgctgttgtgaagcaggctaagagattgactgtt
tcgtattgtagaattcacttaggtaatccagatatgtttactagcaatggtgagagtaat
gctactaagtcgtcggtttatccactacttggattgttgtattctcaattttcgagttct
gtagatgcgtttggaggaagtagtagtagtactgatggtggattgagttgtccaccaggg
tttttagaggaatttttcagagatacggatatggatagtatggaatcaatttttaaagaa
atgtatgaaagtttaagaggaagtgttttgaaagtatcagcgcttgggaattttcagcag
ccgttaagagctttaaggatgttggttaatttcccacatggtgcaaaagctttggtgagt
cacccatggtggttacctaccggaacgtatgtgaatggacgcgttattgaaatgacaagt
atactcgggcctttcttccatgtcagtgctcttccggatcatactatcttcaagagcgaa
ccagatgttggacaacaatgtttctcaaattcacggcgtccagctgatctgcaatcttcc
ttctcaacaattaagactgtcatgaataacttatatgatggagttgcagaagtctttctc
tatcttttaaaaaacagtgatactcgggaatgtgttctcagttatcttgctgaggttatt
aagaaaaatgctacaagggctcatatgcaggttgatccagttacttctgcaagttcaggc
tcgtttgtaaatcttagcgctgtgatgcttcggttgtgtgaaccctttctagatgcaagt
ttaactaagagggacaaaattaaggcaacatatgtgtttgataatactcgtttggacttc
agaggattaactgcactccatgcatcatcggaagacgtgacgtcatggcttgataatctt
aaaatggatggctctgaccggacatctgatgaagataaccggatgttgaaatctcaagaa
gccacaagttctggcagcagcgttggtttacctgctagtctctctaaagctaggccaatg
acaatgtgtggtggaaagactcaatacaattttgtctgtgaatgtttttttatgaccgca
agggtgctcaatttgggtctactcaaagcattttccgactataagcatctagctcaggcc
ttgtcgaggagcgaggatacactgtccaaccttaaaggaatgcctcccactccacagctc
caggcagatatagatcgtctggagaaagaagttgaatttttatctcaggagaagttgtgt
tatgaagcacagatattgagggacggatcatttattcagcgcacactctctttctacaga
ttgatggttgtttggttggtagatcttgtaggcgggttcaaaatgcccttgccatcgtgc
tgccctatggagcttgcttgtatgcctgaacattttgtcgaagatgccatggaactgctc
atttttgcatctcggatacctagagcgatggacgggttcatgctggatgatttcatgaac
ttcattataatgtttatgggaagtcccaactatatcaagaacccttacctcagagcaaag
atggtagaagtcttgatctgctggatgccagaaagaagcggttcatcttcaacagcttcc
ctttttgagggtcatcaatttgccgtggagtatcttgtcaggaatcttctgaagctttac
gttgacattgagtttactggatcacatactcagttttatgacaagttcaacatacgtcat
aatattgccgaacttctggagtacttatggcaggttcctagtcatcgcaatgcatggata
aagattgccaaagaagaggagaagggagtgtatctgaattttctgaacttcctggtgaac
gacagtatatttcttctggacgaaagtctaaatagaattctggaactgaaagagatagaa
aaagagatggctaataccgtggaatgggaaagaagatcagctcaagagaggcaagaaaga
acccgacagttccgttctcaagagaatattatccgaattgatatgaggttggcgatggaa
gatgtgggcatgctagcatttacttcagaacagattacagtgccttttcttcttccagag
atggttgaaagggttgcaagtatgcttaattactttttgctacaacttgcgggccctcaa
cggaaatctcttactctaaaggaccccgagaagtacgagttccgtccaaagatattgctt
aagcggatcgttgagatttatgtcaatttagcgaagggagaccgagaaaatatttttcca
tttgcaatttcgaaagatggtcgatcatacaatgagcagttgttcaccgctgctgcagca
attttacataggataggtgaggacagtaggatggtacaagaatttcttgagctcggtaac
aaagcaaaactcgcagcttcagaggcaatggatgcagaggctacccttggagagatacct
gatgaattcttggacccaattcaatatacactaatgaaagatccagttatccttccttct
tcaagaattacagtggatcgtcccgttatacaaagacatcttcttagtgacaatagcgat
ccgttcaaccgttctcatcttactcaagatatgcttatcccagatgttgagctgaaagca
agaattgaagagttcatcaggtctcaaggcctaaagaaacatagttctgaagggctaaac
aaggaagcaatgcaaaccgaaacaggtgaaatgatcatgattgagtga
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integrated database retrieval system
