Papaver somniferum (opium poppy): 113334107
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Entry
113334107 CDS
T05758
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113334107
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113334107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
113334107
NCBI-ProteinID:
XP_026436233
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MSSSSGQSQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGRIVNTKCNVGANRNQAFV
EFVDLNQAISMVSYFASSSEPAQVRGKSVYIQYSNRHEIVNNKSSGDIAGNVLLVTIEGV
EAGDVSIDVIHLVFSAFGYVHKIATFEKAAGFQALIQFTDAETAASARNALDGRSIPRYL
LPEHVDSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIEGTTQSVLGPDGKKVE
PESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVATASVAK
ESLEGHCIYDGGYCKLHMSYSRHTDLTVKAHNDRSRDYTIPFSALPPMQQPMPLPPAPGG
WQNPQYTSVHVGNEYSAGAHMQPPGGQASSWDPRMQASSPNYVSGPGTIPGQAYGPPPNP
PNGSAPC
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatcatcagggcaatctcaatttcgttacactcaaacaccatcaaaggttctt
caccttcgtaatctaccatgggagtgcacagaagaagaacttgttgaactttgtaaaccc
tttggaaggatcgttaatactaaatgcaacgtcggtgctaatcgtaatcaagcttttgtt
gaattcgtggatttgaatcaagctatttcaatggtttcatattttgcgtcgtcatcagag
ccggcacaagttcgtggtaaaagtgtatatattcagtattcaaatagacatgaaattgta
aacaataagagttctggtgatattgctgggaatgtcttgttggtgacaatcgaaggtgtt
gaagctggtgatgttagtattgatgttattcacttggtgttctctgcttttggttatgtg
cacaaaatcgctacttttgagaaggctgctggctttcaggcactaatccaattcaccgat
gctgaaactgcagcttcagcacgtaatgcattggatggacgaagtataccaaggtacttg
cttcccgaacatgttgattcctgccacttgcgtatctcctattcagcccatactgacttg
aacatcaagtttcaatcccatcgcagcagagactacacaaatccttaccttcctgttaat
ccttctgcaattgaaggaactacgcagtctgtgttaggtcccgacgggaagaaagtagaa
ccagagagtaatgtgcttcttgcttcaatagagaatatgcaatatgcggtcacggtagat
gtgcttcacacggtattctcggcatttgggactgttcaaaaaattgctatatttgagaag
aatggtggaatgcaggcgctaattcaatatccagatgttgcaaccgcatcagttgccaaa
gaatctttggaaggacactgcatctatgatggcggctattgtaagcttcatatgtcatac
tctcgtcatactgatcttactgttaaggcacacaatgatagaagcagagactacacaatc
ccattttcagctttgccccccatgcaacaacctatgcctttaccacctgctcctggtggc
tggcaaaatccccaatatacttcagtgcatgtaggaaatgaatactctgctggagcacac
atgcaacctcctggtggacaagcatcatcatgggatcctaggatgcaggcgagcagccca
aattatgtctcaggaccaggcactattcctggtcaagcatatggtccaccccccaacccg
cccaatggctctgccccctgctaa
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