Papaver somniferum (opium poppy): 113335218
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Entry
113335218 CDS
T05758
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
psom04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113335218
04120 Ubiquitin mediated proteolysis
113335218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113335218
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113335218
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
U-box type E3
113335218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Het-C
DUF6594
D123
Motif
Other DBs
NCBI-GeneID:
113335218
NCBI-ProteinID:
XP_026437122
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MATGKPKRSPEVIEDILIQRIFLVTLTNTDNKQVMYLEKMAVENLREGKSLLLNRDLMDE
VLVGKLSGQFSGKSLFQYLTGCYGRAFEEGKKISNMKDVDLQSSLLNGVIKPAKKLLARY
CQIDLCNPDMFPHSEKISAGSALLQIIFSAVSQNSNACGNEFLNEFFTETDDYEIMAPIF
KDLYDRLKHEISKVNDSPLGNFVPPLKVFRMLVRFPNGGKALVNHPLWLPKGEAVNGRVI
EEESILGSFFHISHLTDVMISGQPDFELLDSSNSSASHLFELSSANLPAIMCNLYDGLED
ILLCLLNSKDTRERVLEYMGDVIERNSSRAHMNIDKVTCASSGMFVNLSVVMLRLSDPIL
NCLAKRDKIDARYVSIGTRLNLRRLTTLHATEEEIGAWADENKYGKSQYGFICECFFMTA
RVLNLGLLKGISECKSLTKDLSTFKRVLTEVEAQPTTPYSLEEIARLNRLIGLQSNEKSS
YEFQLDNNLQQALSFYRLMIVRLVDSVGGFKMPLPRSCPVEFGCMPEHFVDDAMELLIFS
SEVIPKKLDPYLLNDFMNFIIMFIASPNYITNPYLRAKMLKLLNCWTIKRNDSATAGSPY
QGHQLALASPFQGHKLALGQYLVGSLLKLYVDIEFTQFLEKFFIRNQITQLLKYVWEEPS
HLDAWKKFAKEEEKGVYLNFLNFLINDSIYLQDEGLNKIRKLKEMDKQRKMVKEREDRTD
ESHSEVEEEPHSESQSDVERDIREYIALALDNINMLAFTSEQITAPFLLPQMVERIANML
NYFLVQLVGPKRNSLSLKNAEKYGFEPRILLRKIISIYVHIARDDKENTFAAAICKDGRS
YSDKLFTEVAKVRGLGEDGNWMELQEFANLGAKVRLVASEAMDAEAALGEIPDEFLDPIQ
CTLMTDPVTLPSSNVTVERSVIERHLLSDTKDPFNRSHLTQDMLIPDVQLKSRIDEFVRS
RIQHTS
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggaaagccgaagcgatccccagaagtaatagaagatattttaatccaacga
atcttcttagtcacattaacgaatacggataataaacaagtgatgtatttagagaagatg
gcagttgaaaatctccgcgaaggcaagtcacttcttttgaatcgtgatctgatggacgaa
gttcttgttggcaaactttcaggtcagtttagtggtaaatcgctgtttcaataccttacc
ggttgctatggtcgtgcttttgaagaaggtaagaagattagtaatatgaaggatgtcgat
ctgcagtcttctttactgaatggtgttataaaaccagcaaagaaattacttgctcgttac
tgccagattgacttgtgtaacccagatatgtttccgcacagcgaaaaaatatcagcaggt
tctgccttattgcagataatcttttctgcagtttcacagaatagtaacgcatgtggaaac
gaatttctgaatgaatttttcacagaaacggatgattatgagattatggctccgattttt
aaggatttgtacgatagattgaagcatgagatcagtaaagttaatgattcgccacttgga
aatttcgttccacccttgaaggttttcaggatgttagttcgttttccgaatggtggaaaa
gcattggtgaatcacccattgtggttacctaaaggtgaagctgtgaacgggcgcgtaatc
gaggaagagagtatactgggttcctttttccatattagtcatttgactgacgtgatgatt
tcaggccagcctgattttgagctcttagattcctcaaattcgtcagcatctcacctattt
gagctttcatctgcaaacttacccgcaatcatgtgtaacttatacgacggccttgaagac
attcttttatgcttgctgaatagtaaagatacacgagagcgtgttctggagtacatgggc
gatgtcatcgagagaaattcttctagggcgcacatgaacattgacaaggtaacttgtgca
agttcaggtatgtttgttaatctcagtgtagtgatgctacggcttagtgacccgatctta
aactgtttagcaaagagagacaagatagacgcgagatatgtgtctattggtactcgtctg
aacttgagaagactaactactcttcatgcgaccgaagaagaaattggggcatgggctgat
gaaaataagtatgggaagagtcagtacggttttatatgcgagtgtttttttatgactgct
agggtccttaacttgggattactcaaaggtatatcggagtgcaagagtcttactaaagac
ttgtccacgtttaagcgtgtacttaccgaagtggaggcacaacctaccactccttattcc
ctagaggagatagcacgcctcaatcgattaattggtttgcagtctaatgaaaagtcgagt
tatgaatttcagttggataataatcttcagcaggcattgtctttctaccggttgatgatt
gttcggttggtagattctgttggcgggtttaaaatgcctttgccaaggagttgccctgtg
gagtttggttgtatgcctgaacactttgttgatgatgcaatggagttgcttatattttcc
tctgaggttatacctaagaaactggatccctacttgctaaacgattttatgaacttcatt
attatgttcatcgcaagtccgaattatatcacaaatccttatctcagagccaagatgctt
aaactcttgaactgttggacgatcaagagaaatgattcagctacagcaggttccccttat
caaggccatcaattagctcttgcttctccttttcaaggccataaattagctcttggtcag
tatctggttggatctttgttgaagttatatgtcgacattgagtttactcagtttttagag
aaattcttcatacgtaaccaaatcacacaacttctcaagtacgtgtgggaagaaccaagc
catctggatgcatggaagaaatttgccaaggaagaggagaagggtgtttatttgaacttt
ttgaacttcctaataaacgatagcatatatcttcaagatgaagggttaaacaaaatccgt
aaacttaaagaaatggataaacagaggaaaatggttaaagagagggaagacagaactgat
gagtcccattctgaggtggaagaagagccccattccgagtcccaatctgatgtggaacgt
gacatcagggagtacatagcgttagcgttggataatatcaacatgctagcattcacttct
gagcagattactgctccctttcttcttccccagatggttgagagaatagctaatatgctg
aattatttcttggtgcaactagtcggacctaaacggaattctcttagccttaagaatgct
gaaaaatatgggttcgaaccgaggatattactaaggaagattatcagcatttacgttcat
atagcgagggatgataaggaaaatacttttgctgctgcaatttgtaaggatggtcgatcg
tatagtgataaattatttactgaggtagcaaaagtacgtggattaggtgaagatggaaat
tggatggaactgcaagagtttgctaaccttggtgccaaagtcagacttgtagcttcagaa
gcaatggatgcagaagcggcactgggggagataccagatgagttcttagacccaatccag
tgcacgctgatgacagatccagtgactcttccttcttctaatgttacagtcgaacgttcg
gtcatcgaaaggcatcttcttagtgacaccaaagatccattcaaccggtcacatcttacc
caggatatgctcattcccgatgtccaactgaaatctcgaatagatgagttcgtcaggtca
cgaatccagcatacttcatga
DBGET
integrated database retrieval system
