Papaver somniferum (opium poppy): 113335238
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Entry
113335238 CDS
T05758
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113335238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113335238
03036 Chromosome and associated proteins [BR:
psom03036
]
113335238
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113335238
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113335238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
113335238
NCBI-ProteinID:
XP_026437137
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Position
1:complement(200263596..200266994)
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AA seq
352 aa
AA seq
DB search
METSSMSEGLANPNPNNSFEVVQPPDDYISSLCFSPNFKRLAATSWDKTVKCWQIGLSWG
KSGPETATSRLVKSIDNDQPVLCSAWIDDGDTIFWGGCDKQVKMWSYKSNESATVGEHDE
PVKEIAWIPDTKLLATGSWDKTLRYWDLRQPTAVLTQQLPERCYALSVNYPLMVVGTADE
NLIVFDLTKPQVEYKRMQSPLMCQTRCVALFPDNKGFLVGSIEGRVGVYHLDDSQQEKHF
SFDCHREGEKVYSVNSLNFHPVYHTFASAGSDGAFNFWDKDSKLRLKAMSRCNNPITCSA
FTSDGLIYAYAVCYDWSKNAKNRKTSKPRIFLHLPRESEVKGKPPRAGKGRK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaagttcaatgagtgaaggacttgccaatccaaaccctaataactcgtttgag
gttgttcaaccacccgatgattatatatctagtctttgttttagtcctaatttcaagcgt
cttgctgcaacttcttgggataaaacggtcaagtgttggcaaataggattgagttgggga
aaatcaggacctgaaacagcaacaagtcggttggtgaaatcaatagataacgaccagccg
gttttgtgttccgcttggatcgacgatggcgatactattttctggggagggtgtgataaa
caggtgaagatgtggtcatacaagtctaatgaatctgccactgttggggagcacgatgaa
cctgttaaagaaattgcttggataccagatacgaaacttttggctacaggaagctgggat
aagactctcaggtactgggatcttaggcagccgactgcggtccttacacaacagctccca
gaacgttgttacgccctatctgtaaattatcctttgatggttgttggaacagctgatgaa
aatttgattgtttttgacctgactaaacctcaggtggagtataagagaatgcagtcgccc
ttgatgtgtcaaactagatgtgttgctttgtttccagataacaaaggttttctggttggc
tcgattgagggcagagttggtgtctatcatctggatgattctcagcaagagaaacacttc
agcttcgattgccaccgagagggggagaaggtgtactcagtcaactcgttgaattttcat
cctgtttatcacactttcgcatcagctggatcagatggtgcctttaatttttgggacaag
gatagcaaactgagacttaaggccatgtctaggtgcaacaatcctattacttgcagcgca
ttcaccagtgacggccttatatatgcttatgcggtgtgctatgactggagcaagaatgcg
aaaaatcgtaaaacttcaaagccgagaattttcctccacctaccacgggaatctgaggtg
aaaggaaaaccaccacgtgctgggaaaggtagaaagtga
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integrated database retrieval system