KEGG   Papaver somniferum (opium poppy): 113335238
Entry
113335238         CDS       T05758                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113335238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psom03019]
    113335238
   03036 Chromosome and associated proteins [BR:psom03036]
    113335238
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113335238
Chromosome and associated proteins [BR:psom03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    113335238
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_SPT8 WD40_RFWD3
Other DBs
NCBI-GeneID: 113335238
NCBI-ProteinID: XP_026437137
LinkDB
Position
1:complement(200263596..200266994)
AA seq 352 aa
METSSMSEGLANPNPNNSFEVVQPPDDYISSLCFSPNFKRLAATSWDKTVKCWQIGLSWG
KSGPETATSRLVKSIDNDQPVLCSAWIDDGDTIFWGGCDKQVKMWSYKSNESATVGEHDE
PVKEIAWIPDTKLLATGSWDKTLRYWDLRQPTAVLTQQLPERCYALSVNYPLMVVGTADE
NLIVFDLTKPQVEYKRMQSPLMCQTRCVALFPDNKGFLVGSIEGRVGVYHLDDSQQEKHF
SFDCHREGEKVYSVNSLNFHPVYHTFASAGSDGAFNFWDKDSKLRLKAMSRCNNPITCSA
FTSDGLIYAYAVCYDWSKNAKNRKTSKPRIFLHLPRESEVKGKPPRAGKGRK
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggaaacaagttcaatgagtgaaggacttgccaatccaaaccctaataactcgtttgag
gttgttcaaccacccgatgattatatatctagtctttgttttagtcctaatttcaagcgt
cttgctgcaacttcttgggataaaacggtcaagtgttggcaaataggattgagttgggga
aaatcaggacctgaaacagcaacaagtcggttggtgaaatcaatagataacgaccagccg
gttttgtgttccgcttggatcgacgatggcgatactattttctggggagggtgtgataaa
caggtgaagatgtggtcatacaagtctaatgaatctgccactgttggggagcacgatgaa
cctgttaaagaaattgcttggataccagatacgaaacttttggctacaggaagctgggat
aagactctcaggtactgggatcttaggcagccgactgcggtccttacacaacagctccca
gaacgttgttacgccctatctgtaaattatcctttgatggttgttggaacagctgatgaa
aatttgattgtttttgacctgactaaacctcaggtggagtataagagaatgcagtcgccc
ttgatgtgtcaaactagatgtgttgctttgtttccagataacaaaggttttctggttggc
tcgattgagggcagagttggtgtctatcatctggatgattctcagcaagagaaacacttc
agcttcgattgccaccgagagggggagaaggtgtactcagtcaactcgttgaattttcat
cctgtttatcacactttcgcatcagctggatcagatggtgcctttaatttttgggacaag
gatagcaaactgagacttaaggccatgtctaggtgcaacaatcctattacttgcagcgca
ttcaccagtgacggccttatatatgcttatgcggtgtgctatgactggagcaagaatgcg
aaaaatcgtaaaacttcaaagccgagaattttcctccacctaccacgggaatctgaggtg
aaaggaaaaccaccacgtgctgggaaaggtagaaagtga

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