Papaver somniferum (opium poppy): 113335773
Help
Entry
113335773 CDS
T05758
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113335773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113335773
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113335773
Spliceosome [BR:
psom03041
]
Complex C
Other components
Step II factors
113335773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_N
Motif
Other DBs
NCBI-GeneID:
113335773
NCBI-ProteinID:
XP_026437623
LinkDB
All DBs
Position
1:complement(74900959..74902092)
Genome browser
AA seq
377 aa
AA seq
DB search
MTHSFLLREFVRDENLSQYSVIIVDDAHWRTIVSDTICCLLKSLILRRPGLKCIITSQIR
EEADVLADYFLANVFLYEPKTFYVVDEYPIEPVSDYLDSSLIQVLQIHLTKPEGDILVIL
TDQEDVIRAYHSLHERMSGLRNIVPELLIVPVYDVPVPSEMQAKVYGRTPTGFRKVVLAP
CTAEASLSIHNVLYVVDSGAEKQFIYDEREGTNSLVIARISGASENVRKNLAGRSRYGGI
CYRMYPCTEVMLFRSYSECGRMNLQFFIVLIMQVMGIKDVHDFPDSPSPQVIKSAMKQLT
DVHALDEEGNVTKIGKKWQNFYWILHHLKLSSHSSQMTEIIISLFDKKISIFLYLYVDYV
EILLQHLNNISKISFFC
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgactcatagttttcttctcagggagtttgttcgtgatgaaaatctttctcagtattct
gtcatcatcgtggatgatgctcattggagaacaattgttagcgacactatttgttgttta
cttaagtcactcatcctacgtagacctggccttaagtgtatcataacatcccaaattaga
gaagaagcggatgttttagcggactatttcttagctaatgtgttcctctatgaaccaaaa
acattttatgtcgttgatgagtatccgatagaaccagtaagcgattatctagacagttca
ttaattcaagttctacagatccatctaaccaaaccagagggtgacattcttgtcatctta
acggatcaagaagatgtcatccgagcttaccattctttgcacgagagaatgagcgggcta
agaaatattgtacctgagctattaattgtgcctgtgtacgatgttcctgttcctagtgag
atgcaggcgaaggtttatggtagaactcctaccgggtttaggaaggttgttctggcacct
tgtactgctgaggcttcattatccatccataatgtactttacgttgtcgattctggagcg
gagaagcagtttatttacgatgaaagagagggtactaattctttagtcattgcacgcatt
tcaggagcttcggaaaatgtccggaaaaaccttgcaggtcgatcaagatatggtggcatc
tgttatcgaatgtatccctgcactgaagtaatgctgtttcgttcatactctgaatgtggg
aggatgaatcttcagttttttatagtacttataatgcaagttatgggcataaaagatgtc
cacgatttcccggattctccttctccccaagttataaaatcggcgatgaaacagctcact
gacgttcacgctttagatgaagaagggaatgtgaccaagattgggaaaaaatggcagaat
ttttattggatcctccatcatctaaaactatcttcacattcttcacagatgactgaaatt
attatcagcttatttgacaagaaaatatcaatcttcctctatctatatgtggattacgtt
gaaattctcttacaacaccttaataatattagtaagataagtttcttctgttaa
DBGET
integrated database retrieval system
