Papaver somniferum (opium poppy): 113336105
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Entry
113336105 CDS
T05758
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113336105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113336105
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
SR proteins
113336105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
113336105
NCBI-ProteinID:
XP_026437885
LinkDB
All DBs
Position
Unknown
AA seq
267 aa
AA seq
DB search
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA
FVRYKYPDEASKAVEKLDGRNVDGRDIMVQFAKYGPNAERISKGRVSEPVAKTRGSRERS
RSRSPRRSSRSRDEHRGRDSRRRSRSRSRERYDDRSRGRGRDSRHRSRTRSLTPDYRKGG
SRSRYEEERRRSRSKSAGSASPVRRSPSPRKRSLSPRRTPPRGESPDRRSHESPRKRSPS
PIPRSVSPQREPARSRSPSQQNSDADD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactttggaagatctggtcctccagatatcagagatacttactctcttcttgtt
cttaacatcaccttccgtactactgctgatgatcttttccctctatttgataagtacggc
aaagttgttgatattttcataccaagagatcgaaggactggagattctcgtggatttgct
ttcgttcgatacaaatatccagatgaagcttcaaaagctgttgaaaagcttgatggaagg
aatgttgatggaagggatattatggttcaatttgcaaagtatggtcccaatgctgaacga
atctctaaaggaagagtaagtgaaccagtagcaaagactagagggagtcgggaacggtct
agaagccgcagcccccgtcgaagttccaggtctcgtgacgagcataggggtcgagatagt
agaaggagaagtcgtagtaggagtcgggaacgatatgatgacagatctcgtgggaggggt
agagattcacgccaccgcagtaggacccgcagcttaactcctgattaccggaagggtggt
agtcgaagtcgatatgaggaagagcgccgaaggagcagaagcaagtccgccggcagtgcc
tctcctgttcggcgcagtcctagtcccaggaaaaggagtttatctcctcgcaggactcct
cctaggggtgaaagccctgatagacgcagtcatgaaagtcccagaaaaaggagcccatct
cctattcctagaagtgtttctccacagcgtgaacctgctcgttctcgtagcccatcacaa
cagaattctgatgccgatgactga
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integrated database retrieval system
