Papaver somniferum (opium poppy): 113336786
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Entry
113336786 CDS
T05758
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113336786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113336786
Spliceosome [BR:
psom03041
]
Complex C
Other components
Step II factors
113336786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_TEP1_C
PQQ_2
Beta-prop_Vps41
NBCH_WD40
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
113336786
NCBI-ProteinID:
XP_026438247
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MVNGSVLVKIWDVHNSGHKCMRTYMGHGMAVRDISFSNDGSKFLSDGFDKNIKYWDTETG
QVISSFSTGKVPIVSKQNRDDDKQNILLAGMDDKKVVQWDMNSGRIIQEYQHFGAVNTIQ
FVDDNRRFVTASDDKSLRVWEFGIPVVIKYISEPFMHSMPAISLHPDSNWLAAQSLDNKI
LVYSAREKFQLNKKKMFAGHIVAGYACQVNFSPDGQYVMSGDGEGKCRFWNWKSCKISQT
LKCHEGVCIGVQWHPSEQSKVATCGWDGMITYWD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggttaatggttcggtgctggttaagatttgggatgttcacaattctggccacaagtgt
atgagaacatatatggggcatggaatggcagttcgtgatatatcgttttcgaatgacggg
tctaagtttttgagtgatgggtttgataagaatatcaagtattgggatacagaaacaggc
caggtgatctcaagcttttcaactgggaaggtgccgattgtgtctaaacaaaatcgtgac
gatgataaacagaacattttactagctggaatggatgataagaaggttgttcagtgggat
atgaactccgggcggattatacaggagtaccagcatttcggggcagtgaatactatccaa
tttgttgatgacaaccggagatttgttaccgcaagtgatgataagtctcttcgagtgtgg
gaatttggaatcccagttgttattaagtacattagtgaaccttttatgcactcaatgcct
gcaatttccttgcacccagattcgaactggcttgcagcgcagagcttggacaataagatt
cttgtttacagtgcaagggagaagtttcagcttaataagaagaagatgtttgcagggcac
attgtggctgggtatgcttgccaagttaatttctcacctgacggacagtatgttatgtct
ggagatggtgagggaaaatgtaggttctggaattggaagagttgcaaaatttcacaaact
ctgaagtgtcacgaaggtgtctgtattggagttcagtggcacccatccgagcaaagtaaa
gtggctacttgtggctgggatggcatgatcacatactgggactag
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