Papaver somniferum (opium poppy): 113338222
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Entry
113338222 CDS
T05758
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Module
psom_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113338222
Enzymes [BR:
psom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113338222
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
113338222
NCBI-ProteinID:
XP_026439467
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Position
1:complement(230360681..230362999)
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AA seq
401 aa
AA seq
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MFNKFMSTSILLRLGLNLFIFSIFILHPLPTNAVTYNVQNFGAKPDGGKTSSTKSLLKAW
DIACKSVKPSTIYVPPGTYLINQVVFSGPCKSKITFQIDGTLVAPTNYYGVGNTGSWILF
NSVTGLTVLGGTIDAHGSGYWACKRSGRNCPQSARSMLFTGSKNIVINGLTSIDSQQAHL
SFNGCDNVMMKNLKIIAPEDSPNTDGIHVQMSNDVTITDSSIQTGDDCVSIGPGAKTILF
KRIECGPGHGISIGSLARDLNEEGVQDITVKNVTFSKSQNGLRIKTWARPSNGFVKNVLY
QNIVMNDVLNPIIIDQNYCPGDKGCPNQNSGVKISGVTYQNIRGTSASPVAIKFGCSPTT
PCSGIKLQSVKLINFDHKPAQSVCLNAGGTALGLVSPRSCL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaagttcatgagtacttctattcttcttcgactcggcttgaatctcttcatc
ttcagcattttcatccttcacccattaccaacaaatgcagtcacttacaatgtccaaaat
tttggagcgaaacctgatggaggaaaaacttcatccacgaaatcactactcaaagcatgg
gatattgcttgtaaatcagtcaaaccttcgacgatttacgttcctcctggaacgtatttg
attaaccaagtagtattcagtggtccatgtaaaagtaaaatcacatttcaaattgatggt
acactagttgcaccaacgaattattacggtgtcggtaacactggtagctggatacttttc
aattctgtcaccggtctgacagttctcggtgggactattgacgctcatggttctggatac
tgggcatgtaaacgttctgggcggaattgcccccaaagtgctaggtcgatgttgtttact
ggttcaaagaatatcgtaatcaatggtttaacatcaattgacagccagcaagctcacctc
tccttcaatgggtgcgacaatgtgatgatgaaaaatttgaagattatcgcacctgaagat
agcccaaacacagacggtatccacgttcaaatgtcgaatgatgtaaccataacagattct
agtatccagactggtgatgattgtgtatcaatcggtccaggggctaaaaccatactgttc
aaacgcatagaatgtggacctggccatggtataagtattgggagtttggcgagggacttg
aacgaagaaggggtgcaagatattacagtgaaaaacgtaacattcagcaaatcacaaaac
ggtttaaggatcaaaacatgggcaagaccaagcaatggttttgtaaaaaacgttctttat
caaaatattgtaatgaatgatgtcctgaaccctattatcattgatcaaaactactgtcct
ggcgataaagggtgccccaatcagaactcgggtgtcaaaatcagtggggtgacataccaa
aatattcgaggaacatcagcatcacctgttgctataaaatttggatgcagccctacaacc
ccatgcagcgggatcaagttgcagagcgtaaagctcatcaactttgatcataaaccggcg
caatctgtgtgtttaaatgctggtggaacagctctaggattagtcagtccaagaagctgt
ttgtaa
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