Papaver somniferum (opium poppy): 113338225
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Entry
113338225 CDS
T05758
Name
(RefSeq) ras-related protein RABF1-like
KO
K07887
Ras-related protein Rab-5A
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04144
Endocytosis
psom04145
Phagosome
psom04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113338225
04145 Phagosome
113338225
04148 Efferocytosis
113338225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113338225
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113338225
04031 GTP-binding proteins [BR:
psom04031
]
113338225
Membrane trafficking [BR:
psom04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
113338225
Endosome - Lysosome transport
113338225
Exosome [BR:
psom04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113338225
Exosomal proteins of other body fluids (saliva and urine)
113338225
Exosomal proteins of colorectal cancer cells
113338225
Exosomal proteins of bladder cancer cells
113338225
GTP-binding proteins [BR:
psom04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
113338225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
MMR_HSR1
AAA_7
FeoB_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
113338225
NCBI-ProteinID:
XP_026439465
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MGCAASLPDRSSKALPGINSANDGTDSKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPESF
NKAQYWVKELQKHGSPDIVMALVGNKADLLEKRQVPIQNALEYAEKNGMFFIETSAKTAD
NINQLFQEIAKRLPREQPAT
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtgcagcatctcttccagatagaagttctaaagcgttgccagggattaattcg
gcgaacgatggaacggactcgaaaaacctaaaagtgaagttagtgttgttaggggattca
ggtgtcggcaaaagttgtatcgttcttcgcttcgttcgtggtcagtttgaccccacatcg
aaagtaactgtcggagcttcatttctttcacagacgattgccttgcaagattctactact
gtcaaatttgaaatatgggatactgcaggccaggagaggtatgctgcattagctccactt
tactaccgcggagcagcagttgcagttgttgtgtatgacataacaagcccagaatccttc
aacaaggcgcagtattgggtcaaggagctacagaaacatggtagtcccgacattgttatg
gccttggtaggcaacaaagcggatcttctggagaaacgtcaagtacccatccaaaacgcc
ctcgagtatgctgagaagaatggaatgttcttcattgagacatctgccaagacagctgat
aacatcaatcaactgtttcaggaaattgctaaaagactaccaagggagcagcctgccact
taa
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