Papaver somniferum (opium poppy): 113338405
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Entry
113338405 CDS
T05758
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113338405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113338405
03016 Transfer RNA biogenesis [BR:
psom03016
]
113338405
Enzymes [BR:
psom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
113338405
Messenger RNA biogenesis [BR:
psom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
113338405
Transfer RNA biogenesis [BR:
psom03016
]
Prokaryotic type
tRNA degradation factors
113338405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113338405
NCBI-ProteinID:
XP_026439630
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All DBs
Position
1:complement(231126683..231135830)
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AA seq
762 aa
AA seq
DB search
MALSLALGRRSNLKCFSVVSSTLNWRIGGLGLGRRGYNTSLPEVVPFKEEFEIGSYRVSF
ETSCPPDDQQSGDVVLTSQYIGKEEDPSSLFRLKENNLLSTKVFSTVSASPLLPDVIPRS
SPRIKVDYQGNQFPTNDGVSQSFMPRESARIIRTPIRPLFPAHFYHDVEVMARVLCCDGE
QNADVMAANATSAALMLSDIPWGGPIGVVRIARVWGEFVINPSRNELYFGDLDLVYACNG
DHQTLMADAQAREVTEKDLKQALQLAHQQAVKYLDPQTALVKKAGKHKKDYTLTMLKEST
IQKIMSLVEAPFEAFFPDSENEKTQIKGDKVLGKITRDAKRVLGVGKHDEEVKVLPNINI
RKKMIGGEESLVKLTEDVKRILEVEEHNDEEKKKAKMVDMLKKKAFHRWISEKDLRVDGR
RLDNVRRLKCEYSKVSELEGSSQFACGLTQVTCTVTQRRPTKDEAKNMGGNHPLLRFPRF
LYNSPPFRVDGNWKLGDCNSYDARDGDFVEKALVVLLPVEYNFPYVVCVDSEAIHSDGSV
STATICGGSVALMASGVPLKKHVAGVSVGTVSEVYPTDGKMNNYRILTDLSSLEEHLVDM
NFKVAGSRDGITAIRLDLNVAGVPLGIICGCLGPALKGCLEVLDTMDQKISNPIYCTSDD
WGWSDATVVAYRLPTKSIERLTVSNGAWQRDFERKTGTRISLTKNGAVTIAAKNETSHLL
ARQKVENIIAHEVEFGRLHEDEATLMKSYVEISAEQVERAYM
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtcattagcactaggaagaagatcaaatctcaagtgcttctcagtggtttcg
agtacgctcaactggaggatcgggggattaggattaggaagaagaggatacaacactagt
ctcccagaagtagttccatttaaggaagaattcgagattggttcttaccgtgttagtttt
gaaacaagctgccctcctgatgatcagcaatctggtgatgttgtattgacgtcacaatac
attggaaaagaggaggacccatcatcgttgtttcgattgaaagaaaataatcttttatct
accaaagtcttctcaactgtttctgcctctcctcttcttcctgatgtcatcccgcgctct
tcgccccgcataaaggttgattaccaaggaaaccagtttcctactaatgacggtgtcagt
cagtctttcatgccgagggagagtgctcgtattattcggacacctattcgtcctcttttt
ccagcacacttttaccatgatgtggaggttatggcaagagttctatgttgcgacggagaa
caaaatgcagatgtaatggctgccaatgctacatctgcagctcttatgctatctgacatt
ccttggggtggcccaattggggttgtgcgtatagcaagggtatggggagaatttgttatt
aatccatcaaggaatgagctttactttggtgacctcgacttggtttatgcctgcaatgga
gatcatcaaactctaatggcagacgctcaagctcgtgaggttacggagaaagatctaaaa
caggcgctacagctagcacatcaacaggctgtaaaatatcttgaccctcaaactgcattg
gttaaaaaagctgggaagcataagaaggattacacattaacaatgctcaaggagagtacc
attcagaaaatcatgagcttggtggaagcaccattcgaagctttctttcctgattctgaa
aatgaaaagactcagatcaagggggacaaagttttgggcaaaattacaagagatgcaaaa
agagtgttgggggtggggaaacacgatgaagaggtgaaggttcttccaaatatcaacata
cgaaagaaaatgattgggggtgaggaatctctggtcaaacttacagaagatgtaaaaaga
atactggaagtggaagagcacaatgatgaagagaaaaaaaaagctaagatggttgacatg
ctaaaaaaaaaggctttccacaggtggattagtgagaaggatcttagagttgatgggagg
cgtcttgacaatgttaggcggttaaaatgtgaatattctaaagtctcagaactggaggga
tcatcacaatttgcttgtgggctgactcaggttacatgcacagtgacacaaagaagacca
acaaaggatgaagctaaaaatatgggtggaaatcatccccttctccgtttccctagattt
ttgtacaatagtccacccttcagagttgatggaaactggaaattaggtgattgcaatagt
tatgatgcacgggacggcgattttgtggagaaagctttggttgtgctgctacctgtagaa
tataactttccatatgttgtttgtgtcgactcagaagctatacattctgatggttcagtc
tctacagccactatttgtggggggagtgttgctttaatggcttctggtgtccctctaaag
aaacatgtggctggtgtttcagtgggcaccgtcagtgaagtttatcccactgatggaaag
atgaacaattaccgaatactgacagatctatcaagtttagaggagcatctagtggacatg
aacttcaaagttgcaggctcgcgagatggaattacagcaattcgattggatttaaatgta
gctggtgttcctttaggtatcatctgtggctgcttaggacctgcattaaaaggttgcctt
gaagtccttgatacgatggaccaaaagatcagtaatcctatttattgtacttcagatgat
tggggttggagtgacgcgacagtagttgcatataggcttcccactaagtctattgaacgc
ttgactgtatctaatggtgcatggcagagggatttcgaacggaaaacaggaacaaggatt
tcgttgacgaaaaatggagcggttacaatagctgcaaagaatgaaacaagtcatttgcta
gctaggcaaaaggttgaaaatattattgcgcatgaggttgaatttggaaggctacatgaa
gacgaggcaaccctaatgaagagctacgtggaaatatcagctgagcaggttgaaagagca
tatatgtag
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