Papaver somniferum (opium poppy): 113338839
Help
Entry
113338839 CDS
T05758
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113338839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113338839
03009 Ribosome biogenesis [BR:
psom03009
]
113338839
04131 Membrane trafficking [BR:
psom04131
]
113338839
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113338839
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113338839
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
113338839
Membrane trafficking [BR:
psom04131
]
SNARE
SNARE associated proteins
Others
113338839
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113338839
Exosome [BR:
psom04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113338839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
AAA_16
AAA_5
CDC48_2
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
RNA_helicase
AAA_28
Parvo_NS1
AAA_18
Mg_chelatase
nSTAND3
AAA_17
IstB_IS21
AAA_7
Vps4_C
Viral_helicase1
ABC_tran
AAA_24
ATPase_2
TsaE
AAA_lid_PRS2_C
NB-ARC
NACHT
Sigma54_activat
DUF815
SLFN-g3_helicase
ResIII
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
113338839
NCBI-ProteinID:
XP_026440019
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MELYIFTNKVQSLVINRNHFVSCYSQNEKMTDQAESSSEPPKGTKRDYSTAILDRKKAAN
RLIVDEAVADDNTAVTMHPVTMEKLDLFRGDTIMLKGKKRKETICVVIADDSCEEPKIRM
NKVVRSNLRVKLGDIVSVHQCPNVKYGKRVHVLPVDDTIEGLTGSLFDAYLKPYFLDAYR
PVRKGDFFIVRGGMRSVEFKIIETDPPEYCVVSPDTEIFCEGEPIRREDEERLDEVGYDD
VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGTGKTLIARAVANETGAF
FFCINGPEIMSKMAGESESNLRKAFAEAEKNAPSIIFIDEIDSIAPKRDKTNGEVERRIV
SMLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHT
KNMKLAEDVELERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDESIDAEILNSM
FITNEHFQTSVGTSNPSALRETTVEVPNVSWEDVGGLETVKRELQETVQYPVEHPEKFEK
FGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDK
ARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNR
PDIIDPALLRPGRLDQLIYIPLPDEASRLQIFKACLRKSPVSKNVNIQVLAKHTEGFSGA
DITEICQRACKYAIRENIEKDIEREKKRSDNPEAMEEDVEDEVPEITASHFEESMKFARR
SVSDGDIRKYQAFSQTLQQSRGFGSEFRFANTSTGAAAGADTTGANPFADPAAEEDDLYS
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggaattatatatcttcacgaacaaggtacaaagtcttgttataaataggaatcacttc
gtctcttgttattcacaaaacgaaaagatgactgatcaagctgaatcttcttcagaacca
ccgaaaggcacgaagagggattatagtacagcaattcttgatagaaagaaagctgccaat
aggcttatcgtcgatgaagctgttgccgatgataatactgcggttacaatgcatcccgta
acaatggaaaagttggatcttttccgtggtgataccataatgcttaagggaaagaaaagg
aaagagaccatctgtgttgttatagctgatgattcatgtgaggaaccaaagatcagaatg
aataaggttgttcgatcaaatctgagggttaaactaggtgatattgtttcagttcatcag
tgccccaatgtgaaatatggaaaacgtgtacacgtattacctgtggatgataccatcgaa
ggtcttaccgggagtctttttgacgcttacttgaaaccatatttcttggatgcataccga
ccagttaggaaaggtgattttttcattgtcagagggggaatgagaagtgttgagtttaag
attatcgagactgatcctccagagtactgtgtagtttctcctgatactgagatcttttgt
gaaggggagccaattagaagagaagatgaagaaagattggacgaagttgggtatgatgat
gtcggtggagtgagaaagcagatggctcagatcagagagttggtggagctcccacttagg
catccacaacttttcaaatcaattggtgttaagccaccaaaggggattttactctacgga
cctcctggaactggtaaaactttgattgccagagctgttgcaaatgaaactggtgccttc
ttcttttgtattaatgggccagaaatcatgtctaagatggctggggagagtgaaagtaac
cttaggaaggcatttgcggaggctgagaaaaatgcaccatccatcattttcattgatgag
atagattcaattgctccaaaacgagataagactaatggcgaagttgagaggagaattgtt
tctatgctgctgacacttatggatggattgaaatctcgtgcccatgttatcgttatgggg
gcaacgaacaggccaaatagcattgatccagctttgaggaggtttggaagatttgatagg
gaaatagatattggtgttcccgatgaagttggacgtcttgaggttcttcgaatccataca
aagaacatgaagctcgctgaagatgtcgaactagaaagggtctcaaaggatactcatggg
tatgttggtgctgatcttgcagctctgtgtactgaagctgcacttcaatgcattagagaa
aagatggatgtgattgacttggaagatgaatcaattgatgcggaaatactgaactccatg
ttcatcacgaatgagcacttccaaacttctgtaggaacaagcaatccttctgctttgcgc
gaaacaactgttgaagtacccaacgtcagttgggaggatgttggtgggcttgaaactgtt
aagagggagctgcaagagactgtccagtacccggtggagcatcctgaaaagttcgagaag
tttggcatgtcgccttcaaagggagttctgttctatggtcctcctggttgtgggaaaaca
cttttggctaaggccattgcaaatgagtgccaagctaatttcatcagtgttaagggccct
gagttgctgacaatgtggtttggagagagtgaagctaatgtgagagaaatttttgacaaa
gcccgacaatctgcaccttgtgtcctcttcttcgatgaactcgactctatagcaactcag
agaggaagtagcgttggagatgcgggcggtgctgctgatagggttttgaatcagcttcta
actgagatggatgggatgaatgcaaagaagacggtgtttatcattggtgccacaaacagg
ccagacataattgatcctgcattgctgagaccagggcgtctcgatcaattaatctacatt
ccattgccagatgaagcctctcggcttcagatcttcaaggcctgcctcaggaaatcacct
gtttccaaaaatgttaacattcaagtccttgctaagcacacggaaggctttagtggagct
gatattacagaaatatgccaacgtgcttgcaagtatgccatcagagagaacattgagaag
gatattgagagagagaagaagagaagcgacaatccagaagcaatggaggaggacgttgag
gatgaagtccccgaaataactgcatctcactttgaggagtcgatgaagtttgcaaggagg
agtgtgagtgatggagacatacgcaagtaccaggctttttcacagaccttgcagcagtcg
aggggatttggaagtgaatttaggttcgctaatacgtcaactggagctgcagctggagca
gacaccactggtgccaacccatttgcagatcctgctgccgaggaagatgacttatacagt
tag
DBGET
integrated database retrieval system
