Papaver somniferum (opium poppy): 113338901
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Entry
113338901 CDS
T05758
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
psom03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113338901
03460 Fanconi anemia pathway
113338901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113338901
03036 Chromosome and associated proteins [BR:
psom03036
]
113338901
03400 DNA repair and recombination proteins [BR:
psom03400
]
113338901
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
113338901
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
113338901
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
113338901
FA (Fanconi anemia) pathway
Downstream FA components
113338901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
113338901
NCBI-ProteinID:
XP_026440082
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MKTTQRLPAWQIFSDDGNSYRWVAHGHDNNTRSEEKPRVVTQHEKNPNSRLPSMQDLLFQ
GSSKLFQSNELNNESPPMFRTGLGKSVAVKKSSILKALSVLGEDTVQYGGGQMQGGDNGH
SFSNTVFQTGSGKTANVSVLGEDNVFNGRGGQMQGGNNGHSFSNTVFQIGSGKTVNVSVF
GEDTILNGGGGQTQGGGNGHSFSNTVFQTGSGKPVNVSSAGLMRAKTLLGLDGDSSQLSN
SDSEAWGKSFQLEEKIEGRTNAFVTSKSIYTCATDYPTDTYITEDNPEKEVLPSILASEI
HNSSSKPSAIKFQTAGGRSISISDDALRRARSLLGDSEIDLLKNEGSLDTPGFSSFEKDN
PFNKIPLNKESDPSAPCLSQAHTVNSHSSNGILPTKGTYLKHKQFPADLEARNPGDNLVK
QINGNGLPYRGNCAKDSNIKPSRSEFSSPYMVAGNSREKDIGSRVKIVGRPLSKPLVDIS
NIVGIAPRNGPSEPHVAVRNSLTKDIGSTVNTVGAPPSGPFIDTPNNIGAACGNKKQVTS
DKRKLGSRSSPSPFKRPRCSRFSAPLDRNISFVLPNATCENSLAKPKLEKIENSVKCMSA
DRAEAYMFLDASSLDVIGAEGFHQMLVRSGASMLNREWVVNHYKWIIWKLACYGRGYPEK
GAMEYLTVLNVLEELKYRYEREVNHAHRSAIKRILEGDASAASMVVLCISAVRFNPNQEL
EAGHGMAPGEEAKKPSSVAKIELTDGWYSVNATLDVALTNLLIAGKLFVGQKLRIWRASL
CGWVAPTSPLEASKTVSLPLHINGTYRAHWAARLGFCKELGPPLAFRCIKADGGLVPRTL
VGVTRVYPVLYKERLTDVDSVVRSERLENKARQLYNERRSTIAEGIALELQREVSNSHGK
NDSDSEEGAQIFKILEGAAEPDVLMADMSAEQLNSFSIYKTKQEAIRQSNMQKVVEKALE
DAGLNERLVTPFMRVRVVGLTSKDSKGQSCTREGLITIWSPTEKQQLELVEGQAYIVSGL
KPLKLDSNTLYIQANGSTIKWQPLASLAAASFESFFSPRKSIFLSNMGEVSLASEFDIAA
VVVYVGESYTSGHQKKQWVFVTDDSMSGSKSLAEGSSNCLLAISFCSPSMGKDSFASISY
TLEGSTVGFCNLVKRAKDQMNNLWVAEATDNSAYSLFNDLPASSHLKIAATSAYRWAKIS
SSTIQKLRERVLFILGDSNPPNS
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgacgcagagattaccagcgtggcaaatattctccgacgacggtaatagttac
cgatgggttgctcacggtcatgataataatactagatctgaagaaaaacctagggttgtg
actcaacatgaaaaaaaccctaattctcgtcttccttcgatgcaagatctcttgtttcaa
ggatcttcaaagctgtttcaaagtaatgaattgaacaatgagagtccacctatgtttaga
actggattagggaaatctgttgcggttaagaaatcttcaattttaaaagctttgtctgtt
cttggcgaggatactgttcaatacggaggaggtcaaatgcaaggtggagataatggacat
agtttctcaaatacagttttccaaactgggtctgggaaaacagcaaatgtttctgttctt
ggtgaggataatgtttttaatggacgaggaggtcaaatgcaaggtggaaataatggacat
agtttctcgaatacagttttccaaatcgggtctgggaaaacagtaaatgtttctgttttt
ggtgaggatactattcttaatggaggaggaggtcaaacgcaaggtggaggtaatggacat
agtttctcgaatacagttttccaaaccgggtctgggaaaccagtaaatgtttcttctgcg
gggcttatgagagctaagacacttttgggtttggatggagactctagtcagttgtcaaat
agtgattcagaagcttggggaaagtcatttcagttggaagagaaaattgaggggcgtact
aatgcgtttgtaacttctaagtcaatttatacgtgtgctaccgactatccaactgataca
tatataacagaagataatccggagaaagaggtactgccaagtatcttggcatctgaaatc
cacaattcctcttctaaaccatcagcaatcaaattccaaactgcaggaggaaggtctata
tcaatttccgatgatgcattgcgacgtgctagaagtcttcttggcgactcagaaattgat
ttgttaaagaatgaaggaagtctagacactccagggttctcatcatttgagaaagacaac
ccatttaacaagattccgctaaacaaagaaagtgatccttctgcaccttgtttgagccaa
gctcatacagttaacagccacagttctaacgggattcttcccaccaaagggacctatttg
aagcataagcagtttcctgctgatttagaagctcggaatccgggggataacttggttaag
caaattaatggaaatgggttgccataccgaggaaattgtgctaaagatagtaatattaag
ccttcaaggagtgaattcagttcaccctatatggttgctggaaattctagggagaaggat
attggttcaagagtgaaaatagtgggaagaccactaagtaaaccattggttgacatatca
aacatcgtcggcattgctcccaggaatggaccctctgaacctcatgttgcagtcagaaac
tctttgactaaggatattggttcaacagtaaacacagtgggagcaccgcccagtgggcca
tttattgatactccaaataacatcggtgctgcttgtgggaataaaaaacaagtaacttct
gataagaggaaacttggaagtagaagttccccctctccattcaaaaggcctcgctgttct
cggttttccgctcctctggacaggaatatttcttttgtactacctaatgcaacatgtgaa
aattcgcttgccaaaccaaagttggaaaaaatagaaaacagcgtgaaatgcatgagtgct
gaccgtgctgaggcgtacatgttccttgatgcttctagcttggatgtaataggagcagaa
ggttttcatcagatgttggttcgttctggtgcttccatgctcaatagagaatgggttgtg
aatcactacaagtggataatttggaaattagcttgttatggaagaggctatccagaaaaa
ggtgccatggaatatttgacagtgctgaatgtgcttgaagagttaaagtacaggtatgag
agggaagtaaatcatgctcatagatctgcaataaaaagaattctggaaggggatgcttca
gctgcttcaatggtggtgttatgcatttctgctgttcgttttaacccaaaccaagaactt
gaggcaggacatggtatggctccaggtgaagaagccaagaagccaagtagtgttgcaaag
atagagttaactgatggatggtattcagtaaatgccactttggatgtagcgctgacaaat
ctgctcattgctggaaaactgttcgtgggccaaaaacttcggatctggagagcatcgtta
tgtggatgggttgcacccacttcacctcttgaggcatctaaaactgttagtttaccctta
cacataaacgggacatacagagcacactgggctgctcggttggggttctgtaaggaactt
ggacctcccttggctttcaggtgtatcaaggctgatggtggtctggtgcccaggacactc
gtcggagtaacacgagtttatcctgttctctataaggagaggttaactgatgtagactct
gttgtgagatcagaaaggttggagaacaaagcccgtcaactgtacaatgaaaggcggtcc
acaattgcagaaggtattgcattggagttgcaaagggaggtctctaattcacatggcaag
aatgacagtgacagtgaagaaggggcacaaatctttaagatccttgagggagctgctgag
ccggatgtattaatggcagacatgagcgctgagcaattaaattctttttctatttataaa
acaaaacaagaggcaatcaggcagtcaaatatgcagaaggttgttgagaaagcattagaa
gatgctggactgaatgagagactagtcaccccatttatgagagtaagggtggttggttta
actagtaaagattccaaggggcaaagctgtactagagaaggcttgataacaatctggagc
ccaacagagaagcagcaacttgagctcgtggaaggacaggcatatattgtttcagggctt
aaacccctgaaattagattcaaataccctgtacattcaagccaatggttctaccattaaa
tggcagccattagcttccttagcagctgcaagttttgaatcatttttctcccctcgcaaa
tcaatcttcttgtcaaatatgggtgaagtttctctagccagtgaatttgatattgctgcc
gtagttgtgtatgttggagagtcttacacatctggccatcaaaagaagcagtgggtgttt
gtaacagatgattccatgtcaggatcgaaatcgcttgcagaaggttcttccaattgttta
cttgctatcagtttctgctcacccagtatgggtaaagattcatttgcatcgatcagttac
acccttgaaggatcaactgttggcttctgtaatctggtgaagcgagcaaaggaccaaatg
aacaatctatgggtggcagaggcaacagataattcagcatattccctttttaatgacctt
cctgcttcttctcacctcaaaatagctgccacttctgcttacagatgggcaaagatctct
tcttcgactattcaaaagctcagggagagggttctatttattcttggagattctaatcct
cctaatagctag
DBGET
integrated database retrieval system
