Papaver somniferum (opium poppy): 113338968
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Entry
113338968 CDS
T05758
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113338968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113338968
03009 Ribosome biogenesis [BR:
psom03009
]
113338968
04131 Membrane trafficking [BR:
psom04131
]
113338968
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113338968
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113338968
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
113338968
Membrane trafficking [BR:
psom04131
]
SNARE
SNARE associated proteins
Others
113338968
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113338968
Exosome [BR:
psom04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113338968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
ATPase_2
AAA_18
AAA_33
Parvo_NS1
nSTAND3
AAA_28
Vps4_C
AAA_7
Mg_chelatase
AAA_17
IstB_IS21
DUF815
ABC_tran
AAA_lid_PRS2_C
AAA_24
NB-ARC
TsaE
AAA_3
Rad17
NACHT
Zeta_toxin
AAA_19
AAA_11
Bac_DnaA
Viral_helicase1
bpMoxR
Zot
IPT
Motif
Other DBs
NCBI-GeneID:
113338968
NCBI-ProteinID:
XP_026440149
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MSILSSSSLVSITKPPSKTSNFLTPAPNFSINLTPEQNCLFSHTRATNLSFNSNHPRIVC
SSSSPPSADGNRLGKVGYADVGGLSKQMAQIREVVELPLKHPQFFESIGVKPPKGILLYG
PPGTGKTSIARAVANETGAFFSSINGPEIIFSKIGESEELLRKAFAQAGKNAPSIIFIDE
IDSIAPKRENTVKGDQLVPQLLTLMDGLNSHAHVIVIGATNKPNSIDPALRRYGRFDREI
YIGVPDQVGRLEILRIHTKNMKLAKDVELERISKDTHGFVGADLAALCTEAAFQCIREKI
DVINLKGKNIDAKLLNSMLITNEHFRTSLRTINPSALRETTVEVSNVSWKDIGGLDTVKR
ELQETVRYPVEHPEMFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL
LAKWFGESEANVRGIFDKARQSAPCVIFFDELDSIATQRGSVGSAGGVASAADRVLNQLL
TEMDGFNPKKTVFIIGATNRPDVIDPALLRPGRLDQLVYIPLPDEASRLQIFKACLRKSP
VSKHVDLQVLAKHTEGFSGADITEICQRACKYAIRENIEKDIEREKKRNDNSKSMEEDWV
QDEVPEVTTTHFEESMKYARRSVSDEDIHKYQAFSQTMQQSRGFESEFRFANSTSP
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctctcatcttcttctcttgtcagtataacaaaacccccgtcaaaaacctct
aattttctaaccccagctcctaatttctccataaacctaacaccggaacagaattgcttg
ttttctcacactagagctactaatttaagcttcaattcaaaccaccctcgtattgtttgc
tctagttcttcgcctcccagtgcagatggaaatagattgggaaaagttgggtatgctgat
gttggtggattgagtaagcagatggctcagatcagagaggtggtggagctcccacttaag
catccacagtttttcgaatcaattggtgttaagccaccaaaagggattttactctatgga
cctcctggaaccggtaaaacatcgattgccagagctgttgcaaacgaaaccggtgccttc
ttttctagtattaatgggccagaaattattttcagtaaaattggggagagtgaagaactc
cttaggaaagcatttgcacaggccgggaaaaatgcaccatccataatttttatcgatgag
atagattcaattgctccaaaaagagagaatacagttaagggtgaccaacttgttcctcag
ctgctgacacttatggatggattaaattctcatgcccatgtaatagttataggggcaaca
aataagccaaatagcattgatccggctttgaggaggtatgggaggtttgatagggaaatc
tatattggtgtacctgatcaagttggacgtcttgagattcttcggatccatacaaagaac
atgaagcttgctaaagatgtcgaactagaaaggatctcaaaggatactcatgggttcgtt
ggtgctgatcttgcagctctgtgtaccgaagctgcatttcaatgcattagagaaaagatt
gatgtgattaacttgaaaggtaaaaacattgatgctaaattactcaactccatgttgatc
acgaatgagcacttccgtacttctttaagaacaataaatccttctgctttgcgtgaaaca
actgttgaagtatccaacgtcagctggaaggacattggtggccttgacactgttaagagg
gagcttcaagagactgttcgataccctgtggaacatcccgaaatgttcgagaagtttggc
atgtcgccttcgaagggagttttgttctatggtcctcctggttgtgggaaaacacttctg
gcaaaggccattgcaaacgagtgccaagctaatttcatcagcatcaagggccctgagttg
ctggcaaagtggttcggagagagtgaagctaatgttagaggaatttttgacaaggccaga
caatctgcaccatgtgtcatcttcttcgacgaacttgactctatagcaactcagagggga
agcgtcggaagtgcgggaggtgttgccagtgccgctgatagagttttaaaccagcttcta
actgaaatggatggatttaatccaaagaagaccgtgtttataattggtgctacaaacagg
ccagacgtaattgaccctgcattgctgagaccaggtcgtcttgatcagttagtctacatt
ccattgccagatgaagcttctcggcttcagatcttcaaggcctgccttaggaaatcacct
gtatccaaacatgtagatttacaagtccttgcaaagcacactgaaggctttagtggagct
gatattacagaaatatgtcagcgtgcctgcaagtatgccatcagagaaaacattgagaag
gatattgagagagaaaagaagagaaatgacaactcaaagtccatggaagaggactgggtt
caggatgaagtccctgaagtaacaacaactcactttgaggagtcgatgaagtacgctagg
aggagtgtgagtgatgaagacatacacaagtaccaggctttttcacagaccatgcagcag
tccagggggttcgaaagtgagtttaggtttgctaatagtacatcgccttaa
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