Papaver somniferum (opium poppy): 113339985
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Entry
113339985 CDS
T05758
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113339985
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
113339985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_12
TPR_16
TPR_14
TPR_19
TPR_17
TPR_11
TPR_6
TPR_7
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_10
TPR_Slam
ARM_TT21_C
ARM_TT21_N
TPR_4
Fis1_TPR_C
RPN7
ARM_TT21_5th
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NatA_aux_su
DUF7017
Motif
Other DBs
NCBI-GeneID:
113339985
NCBI-ProteinID:
XP_026440987
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MACVYIPVQNSEEEVRVTLDSLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKTKQFM
EILEEGSSPEIDEYYADMKAERIAILNALGAYHSYQGKIETKQREKDEHFVSATQFYNRA
SRIDMHEPSTWVGKGQLLLAKGDIEQASSTFKIALQGHPKNVPALLGQACVEFSLNRYTE
SLDLYKRALQVHPNCPAAVRLGIGLCRYKLGQFEKARQAFQRVLQLDPENVEALVALGIM
DLQANDGSGIRRGMEKMQRAFEIYPYSAMALNHLANHFFFTGQHFLVEQLTETALAVSDH
GLMKSHSYYNLARSYHSKGDFEKAGFYYMASVKESSRPQDFVLPYYGLGQVQLKLGDFRS
SLANFEKVLEAYPDSVESMKAVGHIYVQLGQTDKALEILRKATKADPRDAKAFLELGELL
IANNPGAALDSFKTARGLLKKGGEEVPIELFNNIGVLHFEKGEFELAQQTFKEALGDGVW
RDFLEGKLHSSVAITHQYNDMQIFQKLQENGVSVELPWKKVTTLFNQARLLEQLHETEKA
AILYRLILYKYPEYADASLRLAAIAKARNNIPLSIALIGNALKVNEKCPNSLSMLGSLEL
KSDDWVKAKDTFRAAKEATDGKDSYATLSLGNWNYFAAVRSEKRGPKLEATHLEKAKELY
TKVLVQRPANLYAANGTGVVLAEKGQFDVSKDIFTQVQEAASGSIFVQMPDVWINLAHVY
FAQGQFAQAVKMYQNCLRKFYYNTDTQILLYLARTHYEAEHWQDCKKTLLRAIHLAPSNY
TLRFDAGVSMQKFSASTLQKTKRTADEVRATVAELKNAVRVFSQLSAASSLQFHGFDEKK
IETHVGYCKHLLEPAKVHCEAAEREELQNRQRLEVARQVSLAEEARRKAEEQRKLQLEKR
KQEDELKQVRQQEEQFRRVKEQWRSSAPSKRKERANADDEEGGGEKRKKKSGKRRKHEKK
SHYEMDDNEADMGDEHEEYANVNTRDTMNRMMDDEDDNGADVAQDLAAAGLEDSDVEEAA
ASNVNKRRQTWSESDEDEDTTQRRRDNSADPPSDGEVR
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtgtatacattccagtacaaaactcagaagaagaagttagggttactttagat
tcattaccaagagatgcttctgatattcttgatatccttaaagctgaacaagctcctctt
gatctctggctcattatcgcgagggaatacttcaagcaaggaaaaaccaaacaattcatg
gaaatattggaggaaggctcttcgccagaaattgacgagtactatgctgatatgaaagca
gagcgcattgcaatattgaatgcattgggagcatatcatagttatcaaggaaaaatcgag
actaagcaaagagaaaaagatgagcattttgtttcggcaacacagttttataatagagct
tcgaggattgacatgcatgagccttcaacttgggttggtaaaggtcagcttttactggct
aagggtgatatagaacaagcatcttcaacatttaagattgcactgcagggacatcctaag
aatgtgcctgcccttcttggtcaggcatgtgttgagttcagccttaaccgttacacagag
tctttggacttatataagagggcattgcaggtgcatcccaattgtcctgcggctgtaagg
cttggaataggtctctgtcgctacaaacttggacaatttgaaaaagctcggcaagctttt
caacgtgttcttcagttagacccagagaacgttgaggctcttgtggcacttggaatcatg
gacctgcaagcaaatgacggcagtggaattcgcagaggaatggagaaaatgcaaagagct
tttgagatatacccctattctgcaatggctttaaatcatttggcaaatcattttttcttt
accggtcaacattttctggtcgagcaattgactgaaactgcacttgctgtaagcgatcat
ggtctgatgaagtcacattcatactacaatttggcaagatcgtaccatagcaagggagat
tttgaaaaggctggattctactatatggcatctgttaaggaaagcagtaggcctcaagat
tttgtactgccttattatggcttgggacaagtccaactaaagttgggagatttcaggagt
tcacttgcaaactttgaaaaggttttggaggcctatcctgatagtgttgaaagcatgaaa
gctgttgggcacatttatgttcagcttggccagactgacaaagcattggaaatcctgcga
aaggcgacaaaggctgatccacgagatgcaaaggcgtttctggagctgggtgaattgtta
attgcaaataatccaggagctgcattagattccttcaagacagcacgtggtcttctgaaa
aagggtggtgaagaagtgcccattgaactgttcaacaatattggagtacttcattttgag
aaaggagagtttgagctagctcaacagactttcaaggaagcactgggtgatggagtttgg
cgtgatttcttggagggtaaactacacagttcagttgcgatcactcatcagtataatgac
atgcagatattccaaaaacttcaagaaaatggtgtttctgtggaattgccatggaaaaaa
gtcacaacactgtttaatcaggctagactacttgagcaattgcatgaaactgaaaaggca
gctattttgtaccgtctgatcctttataagtatcctgaatatgcggatgcatctctgagg
ctcgctgccattgctaaagcaagaaataatattccactaagcatagcattgattggaaat
gctcttaaggtgaatgagaagtgtcccaattctttgtcgatgcttgggagcttagagctt
aaaagtgatgattgggtcaaggcaaaggatacattccgggctgccaaagaagcaactgat
ggaaaagattcatatgctactctctccctggggaactggaactactttgctgctgtgcgt
tctgagaaaagaggtcctaaattggaagcaacccatctggagaaggctaaagaactctac
actaaagttttggttcaacgtcctgcgaacttatatgctgcaaatggtactggagttgtc
ttagcagaaaagggccagtttgatgtttcaaaagatatttttacccaggtccaagaagct
gcaagtggaagtatatttgtccaaatgcctgacgtctggataaatttggctcatgtttat
tttgctcaagggcagtttgctcaggccgtgaaaatgtatcaaaattgcttgaggaaattt
tattacaatacagacactcaaattcttctctatctggcccgaactcattatgaggctgag
cattggcaagactgcaaaaagactttgttgagagccatccacttggcaccatcgaattac
acactgcggtttgatgctggagtttcaatgcagaagttttctgcatctactctacagaag
acaaagaggacggcagatgaggttcgggcaacagtagcagagttgaagaatgcggtccgt
gtctttagtcaattatctgcagcatccagccttcagttccatgggtttgatgagaagaaa
atagaaacccatgttggatactgcaagcatttacttgaacctgcaaaggttcattgtgaa
gcagctgaacgtgaagagctacagaaccggcaaagactagaagttgcccgtcaggtgtcc
ttagctgaggaagcccgtcgaaaagccgaagaacaaagaaaattacagttggaaaagaga
aaacaagaagacgagttgaagcaagtgaggcagcaggaggagcaattcaggcgtgtaaag
gagcaatggaggagcagcgctcctagcaagcggaaggaaagagccaatgctgatgatgaa
gaaggtggtggagagaagaggaagaagaaaagtgggaagagaagaaagcatgaaaagaaa
tcacactatgagatggatgataatgaagctgacatgggggacgagcacgaggaatatgca
aacgtaaacactcgtgataccatgaatcgaatgatggatgatgaggatgataacggggca
gacgttgctcaagatcttgctgcagcggggcttgaggactctgatgtcgaagaagcggct
gcatcgaatgtaaacaagcggagacaaacatggtcagaatctgacgaagatgaagacaca
acacagaggcggagagataattcagcagatcccccgagtgacggagaagtgagataa
DBGET
integrated database retrieval system