Papaver somniferum (opium poppy): 113340040
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Entry
113340040 CDS
T05758
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113340040
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113340040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
113340040
NCBI-ProteinID:
XP_026441039
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MLSSATSSFSFHHHRHHHHHNQPLIMTLILNSPPLPCGNSKNIFSYHSHHFHRSSFHHHS
FKFLNPKPFRFRSTNHIPSYSSSSSTNPIRQTLQEEDEESLDLSNFDSDDGNLVKNLPSS
PAIEVKELEELPEQWRRTRIAWLCKELPSHNPPTVLRLLNAQRKWINQEDLTYIAVHSMR
KRDNETAFRVYKWMLRQRWFQFDFALATRLADYSGKERKFSRCREIFDDIINKGRVPSES
TFHILTVAYLSSSEEGCLEEACGIYNRMIQFGGYQPRLSLHNSLFRALIGKTGGSSKQFL
QQAEFIFHNIKTSELEIQKDICAGLIWLHSYQDEIDREKIMELREEMKRLGYEEGTDVLV
SLLRAHSKEGDVEETERTWLKLLDSDATLPYQAFVYRMEVYSKVGEPMKSLDIFRAMQEH
LGFTTFVAYNKIIEVMSKTEEIEIVETLVEEFITSSLKPLVPAFINLMRMYSRLNMHGEL
EAAFFRCLEKCIPNRTIYNIYLESLVKVGNFVKASEIFNRMQCDGAIGVNSRACNTILGV
YLLCGENDEAEKVYDLMCKKKFDVEALLMEKLGPILSLSKKVIKKPTRLNLTKEQREILI
GLLLGGVQIESDEERKVHAIQFEFNQESSVHSALKRHIHNEYHEWVKDPSKADEEGEEIP
SKFSTTAHTYFGFYADQFLSKGKPTIPKLIHRWLSPRVLAYWYMYGGHRTSSGDILLKLK
GGNREDVERIVKSLKAMSLDCRVKKKGRVSWIGLFGSNSLGFWKLTETYILDNLKDLLKP
DVESLELDEDQDINFDSETDSEEYVSEQADSKTN
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgctttcttctgctactagctctttctcatttcaccaccaccgccaccaccatcaccat
aatcaaccgttaataatgactctaatcttaaattctccaccactcccatgtggtaatagt
aagaatatcttctcctatcattctcatcactttcatcgcagtagtttccatcatcactct
ttcaaattcttaaaccctaaaccctttcgttttcgttcaaccaatcacatcccttcatat
tcttcatcttcttctactaatccaatccgacagaccctacaagaagaagacgaagagagt
ttggatttgagtaattttgattctgatgatggtaatttggtgaaaaacttgccatcttca
cctgcgattgaagtgaaagaattagaagaattacctgaacaatggagaaggactagaatt
gcttggttatgtaaagaattaccatctcataatccacctactgtacttagacttctcaat
gcacagagaaaatggattaatcaagaagatcttacttacattgctgttcattcgatgcgt
aaacgggacaacgaaaccgcttttcgggtgtataaatggatgcttagacaacgctggttt
caatttgattttgcgctggcaaccaggctagcagactactccgggaaggagcggaaattc
tctagatgtcgtgagatatttgacgatataatcaacaaaggtcgagtgcctagtgagtca
acatttcatattcttacagttgcttatctaagctcatcagaggaaggttgtttagaagaa
gcctgtgggatttacaaccgtatgattcaattcgggggataccaacctcgtcttagctta
cacaattctctattcagagctcttattggtaaaacaggaggctcctcgaaacaatttctc
cagcaagcggagttcattttccataacataaagacatctgaactcgagatacagaaagat
atttgtgcaggtttaatttggttgcatagctaccaagacgaaattgatagagaaaagatt
atggaattgagagaagaaatgaagcgacttggatatgaagaggggacggatgtgcttgtt
tccttattaagggctcactcgaaggaaggggatgtggaagagacagaacgtacgtggctt
aaactcctcgattctgatgctactcttccttatcaagcttttgtttaccgaatggaagtt
tattctaaggtcggagaacctatgaaatcattggacatattcagggcgatgcaagagcat
ttgggtttcaccacttttgtggcatataacaaaatcatagaggtgatgtctaaaactgag
gagattgaaattgtggaaacccttgtggaagagtttataacgagcagtctaaagcctctt
gtgccagcttttattaatctaatgcgtatgtattctagattgaacatgcatggagaactg
gaagctgcctttttccgctgtcttgaaaaatgcattccaaatcgaacaatttataatatc
tacttggaatctcttgtcaaagttggtaattttgtcaaggcttcagagattttcaaccgt
atgcaatgtgatggggcgattggtgtcaactctcgagcatgcaacaccattttaggcgtg
tatcttttatgtggagaaaatgacgaagcagaaaaagtatatgatttgatgtgcaagaag
aaatttgacgttgaggcgctactaatggaaaagctagggcctattctgagcttgagcaaa
aaggtgattaagaagcctacaagactgaatctcaccaaagaacagagagagatcttgatt
ggtttattgttgggtggtgtgcagatagaatcagatgaagaaaggaaggtccatgctatc
caatttgagtttaatcaggaatctagtgttcatagtgcactgaagagacatatccacaac
gaataccatgaatgggtaaaggatccaagtaaggctgatgaggagggtgaagagatacca
tctaaattctccaccactgcacacacttactttggtttttatgcagaccagttcttgtca
aagggcaaacctactatacccaaactgatccatcgttggttgtcaccacgtgtactagct
tattggtacatgtatggcggccatagaacatcctcaggggatatattgctgaaattaaag
ggtggaaatcgagaagatgttgagaggattgtcaagtcattgaaagcaatgtctctggat
tgccgggttaagaagaaaggaagagtttcttggattggtttatttgggagcaactcattg
gggttttggaaactgactgagacatacattttagataacttaaaagatcttttaaaacca
gatgttgaatccttagaactagacgaagaccaagacatcaacttcgacagtgagactgat
tcagaagagtacgtctcggaacaagctgattcaaaaactaactaa
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