Papaver somniferum (opium poppy): 113340078
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Entry
113340078 CDS
T05758
Name
(RefSeq) serine/arginine-rich splicing factor RS31A-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113340078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113340078
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
SR proteins
113340078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
SET_assoc
RRM_3
Nup35_RRM_2
RRM_5
Extensin_1
DbpA
RRM_fung
DUF1866
Motif
Other DBs
NCBI-GeneID:
113340078
NCBI-ProteinID:
XP_026441081
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MRPVFCGSFDYETRQSDLERLFSKYGTVDRVDMKSGFAFVYFDDERDAEDAIRSLDNTPF
GYTKRRLSVEWSRQGERGNRRDGSKSAANQRPTKTLFVINFDPIDTRIRDIEKHFEPYGK
VLHVRIRRNFAFVQFETQEEATKALECTHMSKICGRVVSVEYALRDDSERGGDRRDSPRR
GREDSRSRSRSPVRRRSRPSPDYGRAHSPVYDRYKGPSSNRDRSPDYGRYPSHSPVRRTA
NGRSPVRHSSASRSPVRRTRSPGGCSPVRRTRSPVRRNRSPVGRSPVRRTRSPVGRSPVR
RSPAGGSPNGRSPVRRSPDDCSPV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaggccagttttttgtgggagttttgattatgaaacacggcaatctgatcttgaacgc
ttgttttctaagtatgggactgttgatagagttgacatgaaatctgggtttgctttcgtt
tattttgatgacgagcgtgatgctgaagatgccatccgaagccttgataataccccattt
ggttacactaagcgcaggctttcggtggaatggtcaaggcagggagaacgcggtaatcgt
cgtgatggatctaaatcagcggcaaaccagaggcctactaaaacactgtttgtgataaac
tttgacccaatagatacaaggatccgagacattgaaaagcattttgagccttatggtaag
gtattgcatgtcagaatccgaaggaactttgcatttgttcagtttgagacacaggaagaa
gctactaaagcccttgagtgcactcacatgagtaagatttgtggtagggttgtctcagtt
gaatatgcccttagggatgacagcgagcgtggtggtgataggcgtgatagtcccaggaga
ggaagggaagatagccgttctagaagcagaagtccagtgcgtcgaagaagtagaccaagt
cctgattatggacgggcacacagtccagtctatgatagatataagggaccttcgagcaac
agagatcgaagccctgactatgggcgatatccaagccactcacctgttcgccgcacagcc
aatggccgctcaccggtacggcactcgtctgctagtcgctcaccagttcgacgtactcgt
tcacctggcggctgctcacctgttcgccgtactcgttcacctgtccgacgtaatcgttcc
cctgttggacgctcacctgttcgccgtactcgttcccctgttggacgctcacctgttcgc
cgttcacctgccggcggttctccaaatggccgttcaccagttcgccgttctcctgatgac
tgctcacctgtttga
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