Papaver somniferum (opium poppy): 113340090
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Entry
113340090 CDS
T05758
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113340090
Transcription machinery [BR:
psom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
113340090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_10
GerE
Motif
Other DBs
NCBI-GeneID:
113340090
NCBI-ProteinID:
XP_026441097
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MGVVSISSSASRTLIRLSERFAELHSPLKRPLILAFNTDKKKNILITPSEPIRIPVESPK
ESKRLRRSENKPAKRVKAVAIDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGS
RVVKRRRRYRKKAGEGNKEDGREVNDFVVRNPEKKAKRLNLANRIASRRKEEEEEESVSS
QGYKDSVEQRNVNRLIREYSVATDHVSMDWKKMKIPPVLPASEHAWLFKLMQPMKALLES
KDMLHKDIGKEPTSNELAAAVNMSSVEVRKHLRVGRAARNKLIKHNLRLVLFAINKYFQE
FANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLSTYGLFWIRHAIMRSMTLSSFTRVSYG
LESVRVEIQKTKLQLMFELNRIPEEEEIAEKMGISLERYHEVMRASQGVISLHARHNTTQ
EEFINGITDFDGDKRSLPALLRLAVDDVLDSLKPKENLVIRQRYGLDGKGDRTLGEIAGN
LNISREMVRKHEVKALMKLKHPTRVDYLRRHIF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgagtatatctagttcagcttctcggacactaataaggttaagcgaaagg
ttcgcagaattacattctccgttgaaaagaccattgatcttggcatttaataccgataaa
aagaagaacattttgattacaccaagtgagccgattaggataccggtggagagcccaaaa
gagagcaagagattaagaagatcggagaataagcctgcaaaaagagttaaagctgttgct
attgatgaagctcctttttgtactttagacttggattttaatgaagctgctgtcaaactt
gaaaatctctataacttgagtccaccatctgatgtttctgatttggaggatataggaagt
cgtgttgtgaagagacgtcgtcgatataggaagaaagcgggagaaggcaacaaggaggat
ggcagagaagtgaatgattttgtggtgaggaatccggagaaaaaagcaaagaggttgaat
cttgctaataggattgcatccagaaggaaggaggaagaggaagaagaatctgtgtcaagt
caggggtataaagacagtgtcgagcaaaggaatgtaaataggcttattagggagtactct
gtcgcgactgatcatgtgagcatggactggaagaagatgaaaataccaccagttcttcct
gcttcagagcatgcttggttgttcaaattgatgcaacccatgaaggcgctacttgagtcc
aaggatatgttacataaagacattggaaaggaacccacttctaatgaattagcagctgca
gttaatatgagttctgtcgaagtccggaaacatttaagggttggtcgagccgcgagaaac
aaactgataaagcacaatctccgcctagttttatttgcaatcaacaaatactttcaagag
tttgcaaatggtgcgaagtttcaagacctttgccaagcaggggcaaagggtctcattgta
gccattgaccgttttgaaccaaaacgaaagtctcaattgtctacatatggtctcttttgg
attaggcacgcaataatgcggtcgatgacgctttcgagttttacacgtgtttcctatggc
cttgaatcggttagagtggagatccagaaaacgaaattgcagctgatgttcgagctcaac
aggatacctgaggaggaggagatagcggaaaagatgggaatatctctagagagataccat
gaagtgatgagagcttcccaaggtgtcatctcactccatgcaagacataataccacgcaa
gaggaattcatcaatggaattactgattttgatggtgataaacggagtctaccggctctt
cttaggcttgcagtcgatgatgtgctcgactcgctgaagcctaaggagaacttagtgatc
agacagagatatggacttgatggtaaaggtgacagaacacttggagagattgcaggaaac
cttaatatttcaagagagatggttcggaaacatgaagtgaaagcacttatgaagctcaag
cacccaactcgagtagattacctgcgtaggcatattttctaa
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