Papaver somniferum (opium poppy): 113340148
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Entry
113340148 CDS
T05758
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113340148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113340148
03016 Transfer RNA biogenesis [BR:
psom03016
]
113340148
Enzymes [BR:
psom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
113340148
Messenger RNA biogenesis [BR:
psom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
113340148
Transfer RNA biogenesis [BR:
psom03016
]
Prokaryotic type
tRNA degradation factors
113340148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
Motif
Other DBs
NCBI-GeneID:
113340148
NCBI-ProteinID:
XP_026441136
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MAMAFALGRRRNATNSFSTLPKNAIRLYQTYKEEFQIGSCCLSFETTPPNQFDDSGGGGG
GGGDGVVLTMRDTLQSMLRTNSFPRIIVDYQGNRDNFGARSGGTRIIRTPVRPLFPKGFY
HDVQVMERVLCCSEQQDIDVLAANATSAALMLSDIPWGGPIGVVRVGRIQGEFLVNPQKS
ELACCDIDLIYACTRDKTLMVDVQANDVVEEDLEVALRLAHQEAVKYIDPQIKLADKAGK
CKKDYKLSMRFKESTVLKIESLAETPFEAAHDSAAYDQKSKGEEYLAKISGDAKNLLEVE
ECDEWKTKLLYSHMVNKLRKKIFQRWNVENGIRLDGRRFDEVRRVECESTRMSGLHGSSC
SACGVTKVSCTVTQTRPGTDEAEPQSGFVDHLNYYNPIRYPGYLYKTRPFRIEGDWKKCS
DKIYEADDANFVENALVALLPKEDIFPYVVRVNSQVVCHDGSASAATVCGVSIALMDAGV
PQRKHVADVSLGLLREGSTLHGYRYRILTDLSSSEEQLGDMNLKVAGSCEGITAVQLDLN
VAGVTLDIICDCLRPALNARLQILYRMEQEISVPRYCVSNDWLWPYPIVAEYFLPVQHVD
RLIDGHRRRFERDTREDTFEEATGSRITSLGKKW
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggcatttgccctaggtcggagaagaaatgcaacaaattccttctcaacccta
cctaaaaatgctattaggttataccagacatacaaggaagaatttcagattggatcttgc
tgtttaagttttgaaacaacaccacctaatcaatttgatgattctggtggtggtggtggt
ggtggtggtgatggggttgtactgacgatgcgagatacgcttcaatcgatgttaagaaca
aactcattcccacgcataattgttgattaccaaggaaatagggataattttggtgcacgc
agcggcggtactaggattattcgtacacctgtacggccactcttccctaaaggcttctac
catgatgtgcaagtcatggaaagagtactatgttgcagcgagcagcaagatatagatgta
ttagctgcaaatgcaacatctgcagctcttatgttgtcagatattccttggggaggcccg
attggagttgtgcgagtaggaaggatacaaggagaatttctggttaacccacagaagtct
gaacttgcttgttgtgatatcgacttgatttatgcttgtactcgagataaaaccctaatg
gtagatgtacaagctaatgatgttgtagaggaagatcttgaagtggcgctaaggctagca
catcaagaagctgtaaaatatattgaccctcagattaaattggctgacaaagctgggaaa
tgcaagaaggattataaattatctatgcgttttaaggagagcactgtccttaaaattgag
agcttggcagaaacaccatttgaagctgcacatgattctgctgcgtatgatcagaagagt
aaaggtgaagaatatttggcaaaaattagtggagatgcaaaaaatttactggaggtagag
gaatgcgatgagtggaaaacgaagctgctatattcacatatggtcaacaaactgcggaaa
aagattttccagagatggaatgttgagaatggtataagacttgatgggaggcgctttgac
gaagttagacgagtagaatgtgaatcaactagaatgtcaggattacatggttcgtcatgt
tctgcgtgtggcgtgactaaagtttcatgcacggtgacacaaacaagaccaggaacagat
gaagctgaacctcaatctgggtttgtggaccatctgaactattacaaccctattcgttat
cccggatacttgtacaagactcgaccctttaggattgagggagactggaaaaagtgtagt
gacaaaatttatgaagctgatgatgccaattttgtagagaatgcgctggttgcactttta
cctaaagaagatattttcccttacgttgttcgtgtcaactcacaagttgtatgtcatgat
ggttctgcctctgcagccactgtttgtggagtgagtattgcgttaatggatgctggtgtc
ccgcaaaggaaacatgtggcagacgtttcattgggtctactaagagaaggaagtactctg
catggttaccgttaccggattttgactgatttgtcaagttcggaagagcagctaggtgac
atgaacttgaaagttgcaggctcatgcgaaggaattactgcagttcaattggatctaaat
gttgctggagttactttagacattatatgcgattgcttacgacctgcattaaacgctcgc
cttcaaatcctctatcgcatggaacaagagataagtgttcctcgctattgtgtttcaaat
gattggttatggccttacccgatagtagctgaatattttctccctgttcagcatgttgac
cgcctgattgatggtcacagacgtaggttcgaacgtgatactcgtgaggatactttcgaa
gaggctacgggttcaagaattactagcttgggaaaaaaatggtaa
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