Papaver somniferum (opium poppy): 113341935
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Entry
113341935 CDS
T05758
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
113341935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113341935
03029 Mitochondrial biogenesis [BR:
psom03029
]
113341935
Membrane trafficking [BR:
psom04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
113341935
Others
Specific organelles associated proteins
Auto phagosome
113341935
Mitochondrial biogenesis [BR:
psom03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113341935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ATG16
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_RIG_2nd
NBCH_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WDR54
PROPPIN
Beta-prop_IFT122_1st
eIF2A
Ge1_WD40
PQQ_2
Beta-prop_DCAF12
Cytochrom_D1
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
DUF641
CENP-F_leu_zip
DUF948
Motif
Other DBs
NCBI-GeneID:
113341935
NCBI-ProteinID:
XP_026442432
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MIMNPEELAMRAINHALKALKKRHLLEEGAHAPAFVALSRPFASQGSEWKEKAENFELEL
QQCYKAQSRLSEQLVTEVAECRTAKALVQEKETLINDLQTEVTQTREECSQLKESLEEKT
KAVDLVMSENKELRAQLEEMTLKAKTAEDENKMLIDRWMLQKMQDAERLNEANALYEEMM
NRLKASGLEQLANQQVDGVVRQFEAGAENFAGSTVPTACKHKIPAHEGGCTSILFEYQSD
RLISGGQERSVKIWDTKTGMLTRTLDGSLGSILDLTVTHDNRYIIAASSSCNLYVWDVNS
GRIRHTLTGHKDKVCAVDVSKVSSSLVVSAAYDRTIKLWDLQKGYSTLTMMSHSNCNSLC
FSMDGQTICTGHTDGNLRLWDITKGEVVSEVAAHSNAITSISISRSGNNILTSGRDNLHN
LFDMRSMEVCGTFRATGNRLANNWSRSCISPDDRYVTSGSADGSVYVWSRFRSDIVSTLR
EDYSPINACAWSGLGKPLASADKNGTICIWT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgaatccggaggaattagccatgagagctataaaccacgctttgaaagcctta
aaaaaacgtcatttacttgaagaaggagctcatgctccagcttttgtagcgctttcaagg
cctttcgcatctcagggttcagaatggaaagaaaaagcggaaaactttgaattagaactg
caacaatgttataaagcacaatcaagattatctgaacaacttgtgacagaagtggcagaa
tgtagaactgcaaaagcattggttcaagagaaagaaacattgattaatgatcttcaaact
gaggttactcagacaagggaggagtgttcgcaattgaaagaaagcttggaagaaaagacg
aaagcagtagatttggtaatgagtgagaacaaggagctaagagcacagctagaagaaatg
actttgaaggcaaaaactgctgaagatgaaaataagatgttgattgatcgttggatgttg
caaaagatgcaggatgctgaacgacttaatgaggctaacgctttatacgaagaaatgatg
aatcgactaaaagccagtggcttagaacagcttgcaaatcagcaagttgatggtgtggtc
cgacaatttgaagcaggagctgagaactttgctggatcaactgttcccactgcttgcaag
cacaagataccagcccatgaaggtgggtgtacatcaatcttgtttgaataccagtcagat
aggttaatcagcgggggtcaagagcgcagtgtcaaaatttgggatacgaaaactgggatg
cttacccgtactcttgatggaagcctaggctctattcttgatctcactgttacccatgat
aacagatacattattgctgcaagcagctcgtgcaacttatacgtatgggatgtgaattct
ggcaggattcgtcatactcttacaggccacaaagacaaagtttgtgctgtagatgtgagc
aaagtttcaagcagtcttgtagttagtgctgcttatgaccgaacgataaaactttgggat
ctacagaaaggctactctaccttgacgatgatgtcccacagcaactgtaattctctttgt
tttagcatggacggacaaacaatttgcacaggtcatactgatggaaacctccggttgtgg
gatattacaaaaggggaggtagttagtgaagttgctgcacattcaaatgccattacatca
atcagtatctctcgaagtggcaataatatattgactagtggaagggacaatctgcacaac
ctatttgacatgcgttcaatggaagtttgtggcacgtttagggcaacagggaacagattg
gcaaataattggagtcgttcctgcatcagtccagatgataggtatgttacatcaggttct
gctgatggttctgtttatgtttggtcaagatttagatcggacatagtgagcactttaagg
gaagattattctcctatcaatgcttgtgcatggagtgggttgggaaagcccttagcttca
gcagataagaatggaactatttgcatatggacatga
DBGET
integrated database retrieval system
