Papaver somniferum (opium poppy): 113342093
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Entry
113342093 CDS
T05758
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113342093
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
113342093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
NACHT
Viral_helicase1
AAA_14
NPHP3_N
AAA_7
AAA_5
AAA_30
DUF815
ATPase_2
AAA_28
Cytidylate_kin
RNA_helicase
TIP49
TsaE
ABC_tran
AAA_11
RuvB_N
AAA_2
AAA_24
AAA_33
AAA_17
nSTAND1
IstB_IS21
Rad17
KAP_NTPase
NB-ARC
bpMoxR
AAA_19
PduV-EutP
AAA_3
SLFN-g3_helicase
Mg_chelatase
SRPRB
nSTAND6
ResIII
AAA_6
PhoH
Cytidylate_kin2
Motif
Other DBs
NCBI-GeneID:
113342093
NCBI-ProteinID:
XP_026442532
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MSVPMEITLPNVTNQEEEAAEEKSIPEAISQSVNLPLLPEDKILVSVEVCLNPSSTARIE
DVQTSIERMLEKRSLSYADGPVPVPIDDQFLVENVQRISICDTDEWVENHEILLFWQVKP
AVHVFQLSEEGPGEELSGDGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASAL
LFTDKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLAIRFSSRYPQCQLVEVNAHSL
FSKWFSESGKLVAKLFQKIQEMVEEDNSLVFVLIDEVESLAAARNAALSGSEPSDSIRVV
NALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCIQE
LIRTKILTDQQEPLILPSFASVREKLNAPSIHESLGPLELAKQLLEASEISEGLSGRALR
KLPFLTHASLTNPNNCEPSKFLQTLIETARRELSELCS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcccatggaaataactttaccaaatgtcacaaatcaagaagaagaagcagca
gaagaaaaatctataccagaagctatctcacaatcagttaatttacctctcttgcctgaa
gacaaaattcttgtttccgttgaagtttgcttgaatccatctagtacagctcggattgaa
gatgttcagacatcgattgagagaatgcttgaaaagaggagtttgagttatgcagatggt
cctgtgcctgtacctattgatgatcagttccttgtagaaaatgttcaaagaattagtatt
tgtgacacagatgagtgggtggagaaccatgaaattcttttattctggcaagttaaaccc
gctgtacatgtttttcagcttagtgaagaaggaccaggtgaggaattaagtggggatggt
caattatctagctttaacgaatggattcttcctgcgaaagaatttgatggcatgtgggaa
agcttaatatatgaatccggtctcaagcaaaggttgttacgatatgctgcaagtgcttta
ctctttaccgacaaaggtgttgatccttttcttgtatcatggaatcgtattgtgctgtta
catggaccaccaggtactggaaagacatctttatgtaaagcattggctcaaaagctcgca
atacgttttagttccagatatccccagtgccaattggttgaggttaatgcacattcttta
ttcagtaaatggttctctgaaagtggtaaattggttgcgaaactttttcaaaaaatccaa
gagatggtagaggaagataacagcctggtgtttgttttgattgatgaagttgaaagctta
gctgctgctcgaaatgctgctttgtctggatccgaaccttctgactcgattagggttgtg
aatgctttactcactcagatggataaattaaaatcctcgcctaacgtcatcatcctaaca
acttcaaatattacagctgcaatagatattgcgtttgtcgatagggcagatattaaggcc
tatgtggggcctccaacccttcaagcaaggtatgagatactaaggtcgtgcatccaggaa
ctgattcgaactaaaattttgacagatcaacaggaaccactcattcttccaagttttgca
agtgtaagagagaagctgaatgcacccagcatacacgagagtctgggtccacttgaattg
gctaagcaattgctggaagcgtcagaaattagtgagggattaagtggaagagcattaaga
aaacttcctttcttaactcatgcctctcttacaaaccctaacaattgcgaacctagcaag
ttcttgcaaacattaattgagactgccaggagggagttgtctgagctatgtagttga
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